DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6462 and Klkb1

DIOPT Version :10

Sequence 1:NP_648011.1 Gene:CG6462 / 38681 FlyBaseID:FBgn0035663 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_036857.2 Gene:Klkb1 / 25048 RGDID:67382 Length:638 Species:Rattus norvegicus


Alignment Length:273 Identity:83/273 - (30%)
Similarity:132/273 - (48%) Gaps:24/273 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 GYENFRLRCEKFEMEGNQTAAVRTRIAGGELATRGMFPYQVGLVIQLSGADLVKCGGSLITLQFV 116
            |...:.||..|.....:.|..:..||.||..::.|.:|:||.|.::|...:.: ||||:|..|::
  Rat   366 GSSGYSLRLCKVVESSDCTTKINARIVGGTNSSLGEWPWQVSLQVKLVSQNHM-CGGSIIGRQWI 429

  Fly   117 LTAAHCLTDAI----AAKIYTGATVFADVED-----SVEELQVTHRDFIIYPDYLGFGGYSDLAL 172
            ||||||. |.|    ..:||.|....:::.:     |::||       ||:..|....|..|:||
  Rat   430 LTAAHCF-DGIPYPDVWRIYGGILNLSEITNKTPFSSIKEL-------IIHQKYKMSEGSYDIAL 486

  Fly   173 IRLPRKVRTSEQVQPIELAGEFMHQNFLVGKVVTLSGWGYLGDSTDKRTRLLQYLDAEVIDQERC 237
            |:|...:..:|..:||.|..:...........||  ||||..:..:.: .:||.....::..|.|
  Rat   487 IKLQTPLNYTEFQKPICLPSKADTNTIYTNCWVT--GWGYTKERGETQ-NILQKATIPLVPNEEC 548

  Fly   238 ICYFLPGLVSQRRHLCTDGSNGRGACNGDSGGPVVYHWRNVSYLIGVTSFGSAEGC-EVGGPTVY 301
            ...:...:::::.........|..||.||||||:|........|:|:||:|  ||| ....|.||
  Rat   549 QKKYRDYVITKQMICAGYKEGGIDACKGDSGGPLVCKHSGRWQLVGITSWG--EGCARKEQPGVY 611

  Fly   302 TRITAYLPWIRQQ 314
            |::..|:.||.::
  Rat   612 TKVAEYIDWILEK 624

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6462NP_648011.1 Tryp_SPc 77..314 CDD:238113 77/246 (31%)
Klkb1NP_036857.2 APPLE 21..104 CDD:128519
APPLE 111..194 CDD:128519
APPLE 201..284 CDD:128519
APPLE 292..375 CDD:128519 3/8 (38%)
Tryp_SPc 391..621 CDD:238113 75/243 (31%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.