DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6462 and Ctrb1

DIOPT Version :9

Sequence 1:NP_648011.1 Gene:CG6462 / 38681 FlyBaseID:FBgn0035663 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_036668.1 Gene:Ctrb1 / 24291 RGDID:2444 Length:263 Species:Rattus norvegicus


Alignment Length:249 Identity:75/249 - (30%)
Similarity:117/249 - (46%) Gaps:32/249 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 TRIAGGELATRGMFPYQVGLVIQLSGADLVKCGGSLITLQFVLTAAHC---LTDAIAAKIYTGAT 136
            :||..||.|..|.:|:||.|. ..:|...  ||||||:..:|:|||||   .:|.:.|    |..
  Rat    32 SRIVNGEDAIPGSWPWQVSLQ-DKTGFHF--CGGSLISEDWVVTAAHCGVKTSDVVVA----GEF 89

  Fly   137 VFADVEDSVEELQVTHRDFIIY--PDYLGFGGYSDLALIRLPRKVRTSEQVQPIELAGEFMHQNF 199
            .....|::::.|::..    ::  |.:..|...:|:.|::|....:.||.|..:.|..  :..:|
  Rat    90 DQGSDEENIQVLKIAQ----VFKNPKFNMFTVRNDITLLKLATPAQFSETVSAVCLPN--VDDDF 148

  Fly   200 LVGKVVTLSGWGYLGDSTDKRTRLLQYLDAEVIDQERCICYFLPGLVSQRRHLCTD-----GSNG 259
            ..|.|...:|||....:..|....||.....::.:..|        ........||     |::|
  Rat   149 PPGTVCATTGWGKTKYNALKTPEKLQQAALPIVSEADC--------KKSWGSKITDVMTCAGASG 205

  Fly   260 RGACNGDSGGPVVYHWRNVSYLIGVTSFGSAEGCEVGGPTVYTRITAYLPWIRQ 313
            ..:|.||||||:|.....|..|.|:.|:||.. |....|.||:|:||.:||::|
  Rat   206 VSSCMGDSGGPLVCQKDGVWTLAGIVSWGSGV-CSTSTPAVYSRVTALMPWVQQ 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6462NP_648011.1 Tryp_SPc 76..311 CDD:214473 73/244 (30%)
Tryp_SPc 77..314 CDD:238113 74/247 (30%)
Ctrb1NP_036668.1 Tryp_SPc 33..256 CDD:214473 73/244 (30%)
Tryp_SPc 34..259 CDD:238113 74/247 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1522379at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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