DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6462 and svh-1

DIOPT Version :10

Sequence 1:NP_648011.1 Gene:CG6462 / 38681 FlyBaseID:FBgn0035663 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_501379.2 Gene:svh-1 / 182375 WormBaseID:WBGene00006620 Length:951 Species:Caenorhabditis elegans


Alignment Length:284 Identity:76/284 - (26%)
Similarity:119/284 - (41%) Gaps:64/284 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 RCEKFEMEGNQTAAVRTRIA---GGELATRGMFPYQVGLVIQLSGADLVKCGGSLITLQFVLTAA 120
            :|....:|.|...|.::|||   ||.....|.||:...|..:.:.|.  .||.|::....::|||
 Worm   692 QCGLRYVEVNARDAAKSRIARVVGGFETVPGAFPWTAALRNKATKAH--HCGASILDKTHLITAA 754

  Fly   121 HCLTDAIAAKIYTGATVFADVEDSVEE-------LQVTHRDFIIYPDYLGFGGYSDLALIRLPRK 178
            ||..:......|  ..|..|.:::..:       ||..|    .||.|.....: |:|::.:|..
 Worm   755 HCFEEDERVSSY--EVVVGDWDNNQTDGNEQIFYLQRIH----FYPLYKDIFSH-DIAILEIPYP 812

  Fly   179 -VRTSEQVQPIEL-AGEFMHQNFLVGKVVTLSGWGYLGDSTDKRTRLLQYLDAEVIDQERCICYF 241
             :..:|..|||.| :.:|:   :..|:...:||||.:|         |:|       .||.....
 Worm   813 GIEFNEYAQPICLPSKDFV---YTPGRQCVVSGWGSMG---------LRY-------AERLQAAL 858

  Fly   242 LPGLVSQRRHLCTDGS-----------------NGRGACNGDSGGPVVYHWRNVSY-LIGVTSFG 288
            :|.:   .|..|.:.|                 .|..:|.||||||......:.:: |.||.|:|
 Worm   859 IPII---NRFDCVNSSQIYSSMSRSAFCAGYLEGGIDSCQGDSGGPFACRREDGAFVLAGVISWG 920

  Fly   289 SAEGC-EVGGPTVYTRITAYLPWI 311
              :|| :...|.:||.:..||.||
 Worm   921 --DGCAQKKQPGIYTMVAPYLSWI 942

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6462NP_648011.1 Tryp_SPc 77..314 CDD:238113 71/266 (27%)
svh-1NP_501379.2 KR 227..306 CDD:214527
LDLa 320..355 CDD:238060
PAN_AP_HGF 373..434 CDD:238532
LDLa 558..590 CDD:197566
SR 599..681 CDD:214555
Tryp_SPc 713..945 CDD:238113 69/263 (26%)
Blue background indicates that the domain is not in the aligned region.

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