DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6462 and Hgf

DIOPT Version :9

Sequence 1:NP_648011.1 Gene:CG6462 / 38681 FlyBaseID:FBgn0035663 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_001276387.1 Gene:Hgf / 15234 MGIID:96079 Length:728 Species:Mus musculus


Alignment Length:284 Identity:74/284 - (26%)
Similarity:108/284 - (38%) Gaps:57/284 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 CEKFEMEGNQTAAV--------------RTRIAGGELATRGMFPYQ--VGLVIQLSGADLVKCGG 108
            |.....||:.|..:              :.|:..|       .|.|  ||.::.|...:...|||
Mouse   465 CPISRCEGDTTPTIVNLDHPVISCAKTKQLRVVNG-------IPTQTTVGWMVSLKYRNKHICGG 522

  Fly   109 SLITLQFVLTAAHCL----TDAIAAKIYTGATVFADVEDSVEE--LQVTHRDFIIYPDYLGFGGY 167
            |||...:||||..|.    .|   .|.|.......||.:..||  .|:.:...::|    |..| 
Mouse   523 SLIKESWVLTARQCFPARNKD---LKDYEAWLGIHDVHERGEEKRKQILNISQLVY----GPEG- 579

  Fly   168 SDLALIRLPRKVRTSEQVQPIELAGEFMHQNFLVGKVVTLS--GWGYLG----DSTDKRTRLLQY 226
            |||.|::|.|.......|..|:|..    ....:.:..|.|  ||||.|    |.      ||:.
Mouse   580 SDLVLLKLARPAILDNFVSTIDLPS----YGCTIPEKTTCSIYGWGYTGLINADG------LLRV 634

  Fly   227 LDAEVIDQERCICYFLPGLVSQRRHLCTDGSN-GRGACNGDSGGPVVYHWRNVSYLIGVTSFGSA 290
            ....::..|:|..:....:......||..... |.|.|.||.|||::.....:..::||...|  
Mouse   635 AHLYIMGNEKCSQHHQGKVTLNESELCAGAEKIGSGPCEGDYGGPLICEQHKMRMVLGVIVPG-- 697

  Fly   291 EGCEV-GGPTVYTRITAYLPWIRQ 313
            .||.: ..|.::.|:..|..||.:
Mouse   698 RGCAIPNRPGIFVRVAYYAKWIHK 721

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6462NP_648011.1 Tryp_SPc 76..311 CDD:214473 68/250 (27%)
Tryp_SPc 77..314 CDD:238113 69/253 (27%)
HgfNP_001276387.1 PAN_APPLE 41..123 CDD:238074
KR 127..209 CDD:214527
KR 211..289 CDD:214527
KR 305..385 CDD:214527
KR 389..471 CDD:238056 1/5 (20%)
Tryp_SPc 495..719 CDD:214473 68/250 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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