DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6462 and St14

DIOPT Version :10

Sequence 1:NP_648011.1 Gene:CG6462 / 38681 FlyBaseID:FBgn0035663 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_446087.1 Gene:St14 / 114093 RGDID:69288 Length:855 Species:Rattus norvegicus


Alignment Length:299 Identity:88/299 - (29%)
Similarity:133/299 - (44%) Gaps:48/299 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 KEETPDDDDAIMERRWQLGYENFRLRCEKFEMEGNQTAAVRTRIAGGELATRGMFPYQVGLVIQL 98
            |::..|..|   |:....|..:|               ..:.|:.||..|..|.:|:||.|....
  Rat   590 KKDCSDGSD---EKNCDCGLRSF---------------TKQARVVGGTNADEGEWPWQVSLHALG 636

  Fly    99 SGADLVKCGGSLITLQFVLTAAHCLTDAIAAKI--YTGATVFADVED-------SVEELQVTHRD 154
            .|.   .||.|||:..::::||||..|....|.  :|..|.|..:.|       .|:|.::  :.
  Rat   637 QGH---LCGASLISPDWLVSAAHCFQDETIFKYSDHTMWTAFLGLLDQSKRSASGVQEHKL--KR 696

  Fly   155 FIIYPDYLGFGGYSDLALIRLPRKVRTSEQVQPIELAGEFMHQNFLVGKVVTLSGWGYLGDSTDK 219
            .|.:|.:..|....|:||:.|.:....|..|:||.|. :..|. |..||.:.::|||:..:. ..
  Rat   697 IITHPSFNDFTFDYDIALLELEKPAEYSTVVRPICLP-DNTHV-FPAGKAIWVTGWGHTKEG-GT 758

  Fly   220 RTRLLQYLDAEVIDQERCICYFLPGLVSQRRHLCTDGSNGRGACNGDSGGPVVYHWRNVS----- 279
            ...:||..:..||:|..|. ..||..::.|.......|.|..:|.||||||:    .:|.     
  Rat   759 GALILQKGEIRVINQTTCE-ELLPQQITPRMMCVGFLSGGVDSCQGDSGGPL----SSVEKDGRI 818

  Fly   280 YLIGVTSFGSAEGC-EVGGPTVYTRITAYLPWIRQQTAM 317
            :..||.|:|  ||| :...|.|||||.....||::||.:
  Rat   819 FQAGVVSWG--EGCAQRNKPGVYTRIPEVRDWIKEQTGV 855

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6462NP_648011.1 Tryp_SPc 77..314 CDD:238113 79/251 (31%)
St14NP_446087.1 SEA 88..178 CDD:460188
CUB 214..332 CDD:238001
CUB 340..444 CDD:238001
LDLa 454..486 CDD:238060
LDLa 492..523 CDD:238060
LDLa 525..559 CDD:238060
LDLa 567..602 CDD:238060 4/14 (29%)
Tryp_SPc 615..852 CDD:238113 79/251 (31%)
Blue background indicates that the domain is not in the aligned region.

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