DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6462 and hgf

DIOPT Version :10

Sequence 1:NP_648011.1 Gene:CG6462 / 38681 FlyBaseID:FBgn0035663 Length:319 Species:Drosophila melanogaster
Sequence 2:XP_002933142.2 Gene:hgf / 100495840 XenbaseID:XB-GENE-999992 Length:710 Species:Xenopus tropicalis


Alignment Length:324 Identity:70/324 - (21%)
Similarity:121/324 - (37%) Gaps:66/324 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 SEPWLDTFEHPKEETPDD---------DDAIMERRWQLGYENFRLRCEKFEMEGNQT-------- 70
            :||.:...|......||:         ||..:.  |..        |.....||:.|        
 Frog   412 NEPDVSILEKNYCRNPDNDAHGPWCYTDDPFVP--WDY--------CHISRCEGDTTKIMANIDS 466

  Fly    71 -----AAVRTRIAGGELATRGMFPYQVGLV--IQLSGADLVKCGGSLITLQFVLTAAHCL----T 124
                 ::.:.|:..|       .|.|...|  :.:...:..||||:||...:||||..|.    .
 Frog   467 PITCSSSKQLRVVNG-------IPTQTRKVWMVSVRYRNSHKCGGTLIKENWVLTARQCFLSGDN 524

  Fly   125 DAIAAKIYTGA-TVFADVEDSVEELQVTHRDFIIYPDYLGFGGYSDLALIRLPRKVRTSEQVQPI 188
            |....:.:.|. .:::..|...:.|.::.   :::    |..| |:|.|::|.|....:..|..|
 Frog   525 DLKDYEAWLGVHNIYSTTEKHKQVLNISQ---LVH----GPKG-SNLVLLKLSRPATLNAYVDRI 581

  Fly   189 ELA--GEFMHQNFLVGKVVTLSGWGYLGDSTDKRTRLLQYLDAEVIDQERCICYFLPGLVSQRRH 251
            :|.  |..:.:|    .:.::.|||:.|  |:.....||.....::..|:|..:....:......
 Frog   582 KLPNYGCTIPEN----TMCSVYGWGHTG--TNDYDGQLQEGTLHIVGNEKCNEHHKGKITVNESE 640

  Fly   252 LCTDGSNGR-GACNGDSGGPVVYHWRNVSYLIGVTSFGSAEGCEV-GGPTVYTRITAYLPWIRQ 313
            :|....... |.|..|.|||::........:.||...|  .||.: ..|.::.|:..|..||.:
 Frog   641 ICAMSETANIGPCERDYGGPLICEENRTHLVQGVIIPG--RGCAIQKRPVIFVRVAYYAKWIHK 702

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6462NP_648011.1 Tryp_SPc 77..314 CDD:238113 57/248 (23%)
hgfXP_002933142.2 PAN_AP_HGF 26..109 CDD:238532
KR 113..195 CDD:214527
KR 197..275 CDD:214527
KR 288..367 CDD:214527
KR 373..454 CDD:238056 9/51 (18%)
Tryp_SPc 478..703 CDD:238113 57/248 (23%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.