DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6462 and LOC100495541

DIOPT Version :10

Sequence 1:NP_648011.1 Gene:CG6462 / 38681 FlyBaseID:FBgn0035663 Length:319 Species:Drosophila melanogaster
Sequence 2:XP_031749237.1 Gene:LOC100495541 / 100495541 XenbaseID:XB-GENE-29082731 Length:659 Species:Xenopus tropicalis


Alignment Length:249 Identity:81/249 - (32%)
Similarity:119/249 - (47%) Gaps:21/249 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 VRTRIAGGELATRGMFPYQVGLVIQLSGADLVKCGGSLITLQFVLTAAHCLTDAIAA---KIYTG 134
            |..||.||..||.|.:|:||.|  ...|:.:  ||||||..|:::|||||...:.:.   ||..|
 Frog   358 VSNRIVGGTDATDGAWPWQVSL--DYHGSHI--CGGSLIATQWIMTAAHCFEYSKSPSDYKIRLG 418

  Fly   135 ATVFADVEDSVEELQVTHRDFIIYPDYLGFGGYSDLALIRLPRKVRTSEQVQPIELAGEFMHQNF 199
            |...:.:  |..|:..| .|.||..........:|:|||||...:..::.:.||.|..  ....|
 Frog   419 AYQLSLI--SPHEITST-VDSIIVNSPNSSSTNTDIALIRLTSPITYTKYILPICLPS--TSDGF 478

  Fly   200 LVGKVVTLSGWGYLGDSTD-KRTRLLQYLDAEVIDQERCICYF----LPGLVSQRRHLCTDGSNG 259
            ..|....::|||.:....: .....||.:...:|.:..|...:    |..:|.....:|...:.|
 Frog   479 TEGMECWVTGWGTIASQVNLPYPMTLQQVMTPLISRATCNQMYNTDSLLSVVVPLDQICAGYAAG 543

  Fly   260 -RGACNGDSGGPVVYHWRNVSYLIGVTSFGSAEGCEV-GGPTVYTRITAYLPWI 311
             :.:|.||||||:|...:.:.|.||:.|:|  |||.| ..|.|||.:.||..|:
 Frog   544 QKDSCQGDSGGPLVCQLQGIWYQIGIVSWG--EGCAVRNRPGVYTLVPAYYSWV 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6462NP_648011.1 Tryp_SPc 77..314 CDD:238113 79/245 (32%)
LOC100495541XP_031749237.1 Tryp_SPc 44..283 CDD:238113
Tryp_SPc 362..595 CDD:238113 78/243 (32%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.