DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6462 and LOC100331291

DIOPT Version :10

Sequence 1:NP_648011.1 Gene:CG6462 / 38681 FlyBaseID:FBgn0035663 Length:319 Species:Drosophila melanogaster
Sequence 2:XP_009295692.1 Gene:LOC100331291 / 100331291 -ID:- Length:932 Species:Danio rerio


Alignment Length:257 Identity:82/257 - (31%)
Similarity:119/257 - (46%) Gaps:31/257 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 RTRIAGGELATRGMFPYQVGLVIQLSGADLVKCGGSLITLQFVLTAAHCLTDAIAAK-------- 130
            |.:|.||..|..|.:|:||.|.::..|.   .||.||:..:::::||||..|:.|.|        
Zfish   688 RAKIVGGTDAQAGSWPWQVSLQMERYGH---VCGASLVASRWLVSAAHCFQDSDAIKYSDARSWR 749

  Fly   131 IYTGATVFADVEDSVEELQVTHRDFIIYPDYLGFGGYSDLALIRLPRKVRTSEQVQPIELAGEFM 195
            .|.|..|...|.::....|:  |..:::..|..|....|:||:.|...|..:|.|||:.:...  
Zfish   750 AYMGMRVMNSVSNAAATRQI--RRIVLHSQYDQFTSDYDIALLELSAPVFFNELVQPVCVPAP-- 810

  Fly   196 HQNFLVGKVVTLSGWGYLGDSTDKRTRLLQYLDAEVIDQERCICYFLPGLVSQRRHLCTDG-SNG 259
            ...|..|....::|||.|.:..:..| |||.....:|:...|...:...:..  |.||... ..|
Zfish   811 SHVFTSGTSCFVTGWGVLTEEGELAT-LLQEATVNIINHNTCNKMYDDAVTP--RMLCAGNIQGG 872

  Fly   260 RGACNGDSGGPVV-----YHWRNVSYLIGVTSFGSAEGC-EVGGPTVYTRITAYLPWIRQQT 315
            ..||.||||||:|     ..|    :|.|:.|:|  ||| ....|.||||:..:..||.|||
Zfish   873 VDACQGDSGGPLVCLERGRRW----FLAGIVSWG--EGCARQNRPGVYTRVIKFTDWIHQQT 928

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6462NP_648011.1 Tryp_SPc 77..314 CDD:238113 78/251 (31%)
LOC100331291XP_009295692.1 SEA 136..220 CDD:460188
CUB 315..415 CDD:238001
CUB 421..528 CDD:238001
LDLa 536..568 CDD:238060
LDLa 606..636 CDD:238060
LDLa 644..679 CDD:238060
Tryp_SPc 691..927 CDD:238113 78/251 (31%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.