DRSC/TRiP Functional Genomics Resources

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Protein Alignment yip7 and hgfac

DIOPT Version :9

Sequence 1:NP_523944.1 Gene:yip7 / 38680 FlyBaseID:FBgn0040060 Length:270 Species:Drosophila melanogaster
Sequence 2:XP_002939269.3 Gene:hgfac / 100485696 XenbaseID:XB-GENE-940012 Length:595 Species:Xenopus tropicalis


Alignment Length:248 Identity:71/248 - (28%)
Similarity:122/248 - (49%) Gaps:33/248 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 GRITNGKDAVAGQFPYQVGLSFSSSAGSWWCGGSIIGNEWVLTAAHC---TDGAASVTIYYGA-T 98
            |||..|..|:.|..|:..|:..    |:::|.||:|...||::||||   :...:.:.:..|. .
 Frog   350 GRILGGNSALPGSHPWVAGIYI----GNYFCAGSLIQPCWVVSAAHCFADSPSKSKIRVVLGQHF 410

  Fly    99 VRTSPEFTQVVSSSKFRQHESYLALTIRN--DISLIQTSSVSFSAT-----VNKISLPAVSNSYS 156
            ...:.:.||.....::..::.| ::..||  ||.||:...::.:..     |..|.||.||..::
 Frog   411 FNQTTDVTQTFEVERYIFYDKY-SVFKRNEHDIVLIKLKRINNACAKKTQFVQTICLPDVSAPFA 474

  Fly   157 TYEGKTAVASGWGLTSDQATAVSRDLQYVDLTIISNSKCQ--ETFGSLIVTSRVLCV---DTTNK 216
              :......:|||...:.:|..:::||...:.::.::||.  |.:|:.| :..:.|.   |.|  
 Frog   475 --DDHHCQIAGWGRMHEDSTEYAQNLQEAIVPLVPDNKCSSPEIYGAEI-SENMFCAGYFDCT-- 534

  Fly   217 ASTCQGDSGGPLALD----GVLIGATSFGSADGC-ESGAPAAFTRITYYRDWI 264
            ..:||||||||||.:    ..|.|..|:|  :|| ....|..:|:::.|.|||
 Frog   535 IDSCQGDSGGPLACEKDKISYLWGIVSWG--EGCGNHNKPGVYTKVSNYVDWI 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yip7NP_523944.1 Tryp_SPc 39..264 CDD:214473 68/245 (28%)
Tryp_SPc 40..267 CDD:238113 69/246 (28%)
hgfacXP_002939269.3 FN2 52..98 CDD:238019
EGF_CA 109..145 CDD:238011
FN1 147..185 CDD:238018
KR 235..319 CDD:294073
Tryp_SPc 351..585 CDD:214473 68/245 (28%)
Tryp_SPc 352..588 CDD:238113 69/246 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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