DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10477 and svh-1

DIOPT Version :9

Sequence 1:NP_001303385.1 Gene:CG10477 / 38679 FlyBaseID:FBgn0035661 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_501379.2 Gene:svh-1 / 182375 WormBaseID:WBGene00006620 Length:951 Species:Caenorhabditis elegans


Alignment Length:262 Identity:69/262 - (26%)
Similarity:105/262 - (40%) Gaps:41/262 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 VHPRDSSAVPSIDGRITNGNKAAANQFPYQVGLSFKSSAGSWWCGGSIIANTWVLTAAHC---TK 86
            |:.||  |..|...|:..|.:.....||:...|..|::. :..||.||:..|.::|||||   .:
 Worm   700 VNARD--AAKSRIARVVGGFETVPGAFPWTAALRNKATK-AHHCGASILDKTHLITAAHCFEEDE 761

  Fly    87 GASSVTIYYGSTVRTSAKLKKKVSSSKFVQHAGYNAATLRNDISLIKT--PSVTFTVSINKIALP 149
            ..||..:..|..........:::...:.:...........:||::::.  |.:.|......|.||
 Worm   762 RVSSYEVVVGDWDNNQTDGNEQIFYLQRIHFYPLYKDIFSHDIAILEIPYPGIEFNEYAQPICLP 826

  Fly   150 AIASSYSTYAGQTAVASGWGRTSDSSIAVATNLQYAQFQVITNAVC-----------QKTFGSSV 203
            :....|:  .|:..|.||||   ...:..|..||.|...:|....|           :..|.:..
 Worm   827 SKDFVYT--PGRQCVVSGWG---SMGLRYAERLQAALIPIINRFDCVNSSQIYSSMSRSAFCAGY 886

  Fly   204 VTSGVICVESINKKSTCQGDSGGPLALNNR-----LIGVTSFVSSKGC-EKNAPAGFTRVTSYLD 262
            :..|:         .:||||||||.|....     |.||.|:  ..|| :|..|..:|.|..||.
 Worm   887 LEGGI---------DSCQGDSGGPFACRREDGAFVLAGVISW--GDGCAQKKQPGIYTMVAPYLS 940

  Fly   263 WI 264
            ||
 Worm   941 WI 942

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10477NP_001303385.1 Tryp_SPc 39..264 CDD:214473 62/246 (25%)
Tryp_SPc 40..267 CDD:238113 63/247 (26%)
svh-1NP_501379.2 KR 227..306 CDD:214527
LDLa 320..355 CDD:238060
PAN_AP_HGF 373..434 CDD:238532
LDLa 558..590 CDD:197566
SRCR_2 599..681 CDD:382996
Tryp_SPc 713..945 CDD:238113 63/247 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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