DRSC/TRiP Functional Genomics Resources

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Protein Alignment PVRAP and rin1a

DIOPT Version :10

Sequence 1:NP_729124.1 Gene:PVRAP / 38677 FlyBaseID:FBgn0052406 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_697152.2 Gene:rin1a / 568715 ZFINID:ZDB-GENE-091204-129 Length:811 Species:Danio rerio


Alignment Length:115 Identity:31/115 - (26%)
Similarity:52/115 - (45%) Gaps:2/115 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   335 LELKDACWYQAGISRDIAVEVLQSKSPGAFLVRKSSSKPGCYALTLRVPSPPGPKIANYIILR-S 398
            |.|....|.|..|:...|:.:|:.:.||.||||:||:... ..|.:|:.....|.....:.:| .
Zfish    35 LLLTHPVWLQLSINSATALHILRREPPGTFLVRRSSTSQK-KMLCVRLADDSMPSFLKQVFIREE 98

  Fly   399 PRGYKIKGFRKEFSSLKALITHHSVMPELLPVPLAMPRPTNMSSSRRNLD 448
            ...:.::.....|..|..||..:.|..::||..|.:|.....:||.:.|:
Zfish    99 DSAFSLESSAISFPDLCRLIAFYCVSRDVLPFTLELPEAIAKASSHKQLE 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PVRAPNP_729124.1 SH2 342..435 CDD:472789 25/93 (27%)
rin1aXP_697152.2 None

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