DRSC/TRiP Functional Genomics Resources

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Protein Alignment PVRAP and tns1b

DIOPT Version :10

Sequence 1:NP_729124.1 Gene:PVRAP / 38677 FlyBaseID:FBgn0052406 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_021334702.2 Gene:tns1b / 555362 ZFINID:ZDB-GENE-030131-6933 Length:1830 Species:Danio rerio


Alignment Length:526 Identity:120/526 - (22%)
Similarity:196/526 - (37%) Gaps:144/526 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 TSVAMSNRNGSTSSSSNSSPTADNSNSNSNSNSNANINRNLNQNPNSNSNTNSNSYFNRFDNRIA 104
            ||:..|..:.|.:.:..::.|.....|.|....:..|..::...||             |.:|:|
Zfish  1232 TSMLGSYISPSPAEAMQNNTTTIQPLSGSPGTRHHTILSDMASVPN-------------FQHRLA 1283

  Fly   105 ANLAAVLTGAGARFRSSSCSNRHPAGVANPAVLRSPLATISRKTSLATPPSPASLGRRRPLQLFT 169
            .....:|.      |..:.:|.|..|:|.     ||:.......|..|..||. |.|:.|:    
Zfish  1284 NQDGPILG------RQQAPANGHVPGIAG-----SPVQGRHTMVSQGTQSSPI-LSRQYPV---- 1332

  Fly   170 HANLNCNDNEKVAQTPSSDEDNSPTELN---SCKRLADKPPLVKR---LTMG------LLRQNEE 222
              ......:..:::.|......|...||   |..:.....|::.|   :|:.      |.||:..
Zfish  1333 --TQGIQSSPILSRQPMGQAVQSSPVLNRQASLNQANQSSPVLSRQQSITLPNQGSPVLSRQSSL 1395

  Fly   223 SRPLVG--------DMTPLSAPLDIQPVY------------------SNGY---------INEDS 252
            |.|..|        .:|..|..||..|:|                  |:||         ::...
Zfish  1396 SHPSQGSPVLGRHPSLTQGSPSLDRHPMYSGYTTPEERHGALSRQSSSSGYQPPSTPSFPVSPAG 1460

  Fly   253 YIDSKFGDSCRQSLTAI-PML-DNVNLNDNNEFN-------LKKRYLRETSSANSSPKI-FANRL 307
            ||:   |...||...|. |.| :...::.::..|       |..:.....||..|:|.: |.:.|
Zfish  1461 YIE---GAGFRQGSPAFQPQLPEKRRMSSSDRTNGGLSYGTLNGKMSSPVSSGGSTPSVHFFHTL 1522

  Fly   308 ----RMNQGAVGQRCSSLANAFGNVGSDEEDLELK-----DACWYQAGISRDIAVEVLQSKSPGA 363
                ::|.      |.         ||.|..:.:|     ...||:..||||.|:.:|:.:.|||
Zfish  1523 PDFSKLNM------CD---------GSPETRMNVKFVQDTSKFWYKPDISRDQAINMLKDQDPGA 1572

  Fly   364 FLVRKSSSKPGCYALTLRVPSPP-------------GPKIANYIILRSPRGYKIKGFRKE--FSS 413
            |::|.|.|..|.|.|.::|.|||             ...:.:::|..||:|.::||...|  |..
Zfish  1573 FVIRDSHSFRGAYGLAMKVASPPPTTQPTKKAGDVTNELVRHFLIETSPKGVRLKGCPNEPYFGC 1637

  Fly   414 LKALITHHSVMPELLPVPLAMP------------RPTNMSSS--RRNLDDFDTYDSLQMLLKYLR 464
            |.||:..||:.|..||..|.:|            .|||.::.  ::......:.|.....:.|:.
Zfish  1638 LSALVYQHSITPLALPCKLVIPTRDPLEESPEIATPTNPAADMLKQGAGQKSSADGHACNVLYIN 1702

  Fly   465 AKNMET 470
            :.:||:
Zfish  1703 SVDMES 1708

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PVRAPNP_729124.1 SH2 342..435 CDD:472789 39/107 (36%)
tns1bXP_021334702.2 None

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