DRSC/TRiP Functional Genomics Resources

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Protein Alignment PVRAP and by

DIOPT Version :10

Sequence 1:NP_729124.1 Gene:PVRAP / 38677 FlyBaseID:FBgn0052406 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_649901.1 Gene:by / 41144 FlyBaseID:FBgn0000244 Length:720 Species:Drosophila melanogaster


Alignment Length:516 Identity:116/516 - (22%)
Similarity:181/516 - (35%) Gaps:153/516 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 GTAATSVAMSNRNGSTSSSS----NSSPTADNSNSNSNSNSNAN---------------INRNLN 81
            |.|.||..:......|...|    :..||..|.||||:||:...               :.:.|.
  Fly    78 GIAKTSTPLRKTPTPTRVDSFLDFDFGPTNTNVNSNSSSNNGGTGDMIKPPTRLTSPLLVRKTLG 142

  Fly    82 Q--NPNSNSNTN--SNSY---------------------------FNRFDNRIAANLAAVLTGAG 115
            .  :|.|::|||  :|:|                           :|.:     .||....:|..
  Fly   143 NAVSPTSSTNTNTIANTYHYTSSSATPTPVRDNFEQLLRERREKVYNEY-----RNLDRESSGER 202

  Fly   116 ARF------RSSSCSNRHPAGVANPAVLRSPLATISRKTSLATPPSPASLGRRRPLQLFTHANLN 174
            ||.      |....|:.:..|:.|.:     ..|:.||       ||:|.|:..........|||
  Fly   203 ARVAPAPPQRQYYPSDGYGIGLKNDS-----NGTLYRK-------SPSSNGKSTKYNYDFEFNLN 255

  Fly   175 CNDNEKVAQTPSSDEDNSPTELNSCKRLADKPP--LVKRLTMGLLRQNEESRPLVGDMTPLSAPL 237
            . |:.:...||.:..:....:|    ||....|  :|.|.||      |.:...:..:.......
  Fly   256 L-DDVRPEPTPYTTRNIHFEDL----RLDQDVPDGVVNRRTM------ERNYHTINSLETTHKRQ 309

  Fly   238 DIQP------VYSNGYINED---SYIDSKFGDSCRQSLTAIPML-------------------DN 274
            .::|      ||...::.|.   :..|.....|..:|.:.:|.:                   .|
  Fly   310 QLEPLEQLGAVYGQNHMEETLTRTRRDLSASTSTSKSTSPLPAIGVPAIAPASPIYATSTKRVSN 374

  Fly   275 VNLNDNNEFNLKKRYLRETSSANSSPK--IFANRLRMNQGAVGQRCSSLA-------NAFGNVGS 330
            .|.|...:.         |.|..|.|:  .|....|...||.....:|||       .:....|.
  Fly   375 PNTNGQQQM---------TPSPTSRPETPAFPVTPRTPFGASSSSSASLAPTTQLPPESIYQTGP 430

  Fly   331 DE------EDLEL----------KDACWYQAGISRDIAVEVLQSKSPGAFLVRKSSSKPGCYALT 379
            ..      :.||:          ....||:..::|:.|:.:|.|..||.||||.|::....|.|.
  Fly   431 RRGVPPALQPLEVSADSVQFARSSSQFWYKPNLTREDAIALLASAQPGTFLVRDSTTYKDSYGLV 495

  Fly   380 LRVPS-PPGPK--IANYIILRSPRGYKIKGFRKE--FSSLKALITHHSVMPELLPVPLAMP 435
            :||.. |||.:  :.:::|..:..|..:||...|  |:||.||:..||:....||..|.:|
  Fly   496 VRVSQPPPGSQELVRHFLIEPTKGGVHLKGCDDEPVFTSLSALVFEHSISQLALPCLLRLP 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PVRAPNP_729124.1 SH2 342..435 CDD:472789 35/97 (36%)
byNP_649901.1 SH2_Tensin_like 454..559 CDD:198181 36/103 (35%)
PTB_tensin 578..711 CDD:269924
Blue background indicates that the domain is not in the aligned region.

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