DRSC/TRiP Functional Genomics Resources

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Protein Alignment PVRAP and Tns4

DIOPT Version :10

Sequence 1:NP_729124.1 Gene:PVRAP / 38677 FlyBaseID:FBgn0052406 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_001020052.1 Gene:Tns4 / 303517 RGDID:1310402 Length:718 Species:Rattus norvegicus


Alignment Length:453 Identity:101/453 - (22%)
Similarity:172/453 - (37%) Gaps:134/453 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 TAGTAATSVAMSNRNG------STSSSSNSSPTADNSNSNSNSNSNANINRNLNQNPNSNSNTNS 92
            |..::..|:..|...|      :.||.|||.|..::..|.|          .|...|.......:
  Rat   190 TRSSSNESLIFSGNQGRGSSPHTPSSLSNSIPCRESRASGS----------PLATPPGWEKGLRA 244

  Fly    93 NSYFNRFDNRIAANLAAV--LTGAGARFRSSSCSNRHPA--GVANPAVLRSPLATISR-----KT 148
            ..:.:|.....|:.::.:  :.|:......||.|:..|:  .:.:||...|.|.::.|     ::
  Rat   245 PQWGSRVSTLSASPVSDISYVFGSNQSLPHSSLSSYPPSSRSLGSPASSSSSLHSLDRGSQCVRS 309

  Fly   149 SLATPPSPASLGRRRPLQLFTHANLNCNDNEKVAQTPSSDEDNS---PTELNSCKRLADKPPLVK 210
            |.|..||...:|..:|              :.|..||.:.|..|   |:..||   :||.|    
  Rat   310 SDAQVPSNPIVGMGQP--------------QAVPSTPVAKEQASSCPPSVTNS---MADIP---- 353

  Fly   211 RLTMGLLRQNEESRPLVGDMTPLSAPLDIQPVYSNGYINEDSYIDSKFGDS--CRQSLTAIPMLD 273
               :.|:..|.|         |.|.|....|.|      :||........|  |:.:.:....|.
  Rat   354 ---IVLINGNPE---------PQSPPAQQTPRY------QDSVQSRATSPSHLCQATKSHSKTLP 400

  Fly   274 NVNLNDNNEFNLKKRYLRETSSANS----------SPKIFANRLRMNQGAVGQRCSSLANAFGNV 328
            :|.|...:       :|.:.:.::|          ||:                           
  Rat   401 DVPLTSPS-------HLCQATKSHSKTLPDVPLTASPE--------------------------- 431

  Fly   329 GSDEEDLE-----LKDAC--WYQAGISRDIAVEVLQSKSPGAFLVRKSSSKPGCYALTLRV---- 382
             |..:|::     :.|..  |.:..|:|:.|:.:|:::.||.|::|.|||..|.:.|.|:|    
  Rat   432 -SPAKDMQPTMKFVMDTSKYWLKPSITREQAINLLRTEKPGTFVIRDSSSYRGSFGLALKVQETP 495

  Fly   383 ---PSPPGPK----IANYIILRSPRGYKIKGFRKE--FSSLKALITHHSVMPELLPVPLAMPR 436
               |:.||..    |.::::..|.:|..:||..:|  |.||.|.:..||:|...||..|.:|:
  Rat   496 ASAPNRPGEDSTDFIRHFLVESSAKGVHLKGADEEPYFGSLSAFVCQHSIMALALPCKLTIPQ 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PVRAPNP_729124.1 SH2 342..435 CDD:472789 35/105 (33%)
Tns4NP_001020052.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 188..244 14/63 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 272..437 46/238 (19%)
SH2 447..560 CDD:472789 36/112 (32%)
PTB_tensin 583..712 CDD:269924
Blue background indicates that the domain is not in the aligned region.

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