DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaKap4 and AT1G77460

DIOPT Version :10

Sequence 1:NP_648007.1 Gene:alphaKap4 / 38675 FlyBaseID:FBgn0035657 Length:442 Species:Drosophila melanogaster
Sequence 2:NP_177870.2 Gene:AT1G77460 / 844082 AraportID:AT1G77460 Length:2136 Species:Arabidopsis thaliana


Alignment Length:447 Identity:93/447 - (20%)
Similarity:175/447 - (39%) Gaps:82/447 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 VNKLLKSNTIGNLVESLGHGNKNKIRADAADALAHIASGSSEHSNLIAKAGAVPRLIRLLQSPDP 119
            :.|:|.|..:.:|::.|...|...:||.|||||..:::.|.|....:..||.|..||..:.:|..
plant   249 IQKILNSGVVKSLIQLLEQKNDINVRASAADALEALSANSDEAKKCVKDAGGVHALIEAIVAPSK 313

  Fly   120 EVCEKG-------ILSLGNLLHFAPNLRDYIIRHGLMQKLMSIIQDKSTCTLMLSHVTWVLRKLC 177
            | |.:|       ..:.|.|.:....:|..||..|.:.:...:.:........|::.      |.
plant   314 E-CMQGKHGQSLQEHATGALANVFGGMRHLIIYLGQVSQSPRLTEPIGDVIGALAYA------LM 371

  Fly   178 ISSQPSPPDNAAE--IIQALNIVLYNP-EANVLEDALMAVRNLAHGNETIQMLLDFEVVPRIIYL 239
            |..||...:|..:  :|:::.:.|..| :..::::.::......:||.::...||.....|::..
plant   372 IFKQPESSENIFDPSVIESILVKLLKPRDTKLIQERILEAMASLYGNSSLSCYLDDAEAKRVLIA 436

  Fly   240 LEHPNVTVQNAALQALINI--------------ATGSEEQIQELLNNNLLPHLSALMSNSDPDIR 290
            |    :|:.:|.::..:.|              |.|..|.||      |......|.|....:..
plant   437 L----ITMASADVRERLIICLSGLCHDKVGIWEAIGKREGIQ------LFISFLGLSSEQHQEYA 491

  Fly   291 CQVLKLLLNIADGNIFQRHAIMNAGLLHKILECLKADAISLKSAAALTITTLAIDKDKNLLCYLM 355
            .::||:|....|.:   :.|:..||.:..:::.|:..:...|..||..:..|....::...| :.
plant   492 VEMLKILTAQVDDS---KWAVTAAGGIPPLVQLLETGSQKAKEDAACILWNLCCHSEEIRDC-VE 552

  Fly   356 RQGVIPEFCNLL-----FCQERDIL-----------SNVLDILSTMLDVDPSFSAEVSGII---- 400
            |.|.||.|..||     ..||....           :.:..:|:.:|..||:...:|..::    
plant   553 RAGGIPAFLWLLKTGGPNSQETSAKTLVKLVHTADPATINQLLALLLGDDPTSKIQVIEVLGHVL 617

  Fly   401 ----------EWSGALNNIRML---QSSEHEEIAAVARKIIGNYFPAKP----HIAT 440
                      ....|...:|.|   .:|..||.......::.:.|.::.    |:||
plant   618 SKASQEDLVHRGCAANKGLRSLVESLTSSREETKEHTASVLADLFSSRQDICGHLAT 674

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaKap4NP_648007.1 SRP1 45..432 CDD:227396 89/433 (21%)
armadillo repeat 98..134 CDD:293788 11/42 (26%)
armadillo repeat 140..176 CDD:293788 5/35 (14%)
armadillo repeat 192..217 CDD:293788 3/25 (12%)
armadillo repeat 224..260 CDD:293788 7/49 (14%)
armadillo repeat 266..300 CDD:293788 8/33 (24%)
armadillo repeat 308..342 CDD:293788 7/33 (21%)
armadillo repeat 350..383 CDD:293788 10/48 (21%)
AT1G77460NP_177870.2 PLN03200 25..2130 CDD:215629 93/447 (21%)
HEAT repeat 125..149 CDD:293787
HEAT repeat 170..204 CDD:293787
armadillo repeat 216..241 CDD:293788
armadillo repeat 249..286 CDD:293788 13/36 (36%)
armadillo repeat 292..335 CDD:293788 11/43 (26%)
armadillo repeat 473..498 CDD:293788 7/30 (23%)
armadillo repeat 506..542 CDD:293788 8/35 (23%)
armadillo repeat 1297..1327 CDD:293788
armadillo repeat 1335..1374 CDD:293788
armadillo repeat 1380..1414 CDD:293788
Blue background indicates that the domain is not in the aligned region.

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