DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaKap4 and MOS6

DIOPT Version :9

Sequence 1:NP_648007.1 Gene:alphaKap4 / 38675 FlyBaseID:FBgn0035657 Length:442 Species:Drosophila melanogaster
Sequence 2:NP_192124.1 Gene:MOS6 / 827472 AraportID:AT4G02150 Length:531 Species:Arabidopsis thaliana


Alignment Length:401 Identity:120/401 - (29%)
Similarity:213/401 - (53%) Gaps:17/401 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 KLTSSEVVPDVNKLLKSNTIGNLVESLGHGNKNKIRADAADALAHIASGSSEHSNLIAKAGAVPR 109
            ||.|.|..|.:|::::|..:..:|:.|...:..|::.:||.||.:||||:||::|:|.::||||.
plant   101 KLLSIEQNPPINEVVQSGVVPRVVKFLSRDDFPKLQFEAAWALTNIASGTSENTNVIIESGAVPI 165

  Fly   110 LIRLLQSPDPEVCEKGILSLGNLLHFAPNLRDYIIRHGLMQKLMSIIQDKSTCTLMLSHVTWVLR 174
            .|:||.|...:|.|:.:.:|||:...:|..||.::.:|.|..|:|.. :::|...||.:.||.|.
plant   166 FIQLLSSASEDVREQAVWALGNVAGDSPKCRDLVLSYGAMTPLLSQF-NENTKLSMLRNATWTLS 229

  Fly   175 KLCISSQPSPPDNAAEIIQALNIVLYNPEANVLEDALMAVRNLA-HGNETIQMLLDFEVVPRIIY 238
            ..|....|...:.....:..|..::.:.:..||.||..|:..|: :.|:.||.:::..||||:|.
plant   230 NFCRGKPPPAFEQTQPALPVLERLVQSMDEEVLTDACWALSYLSDNSNDKIQAVIEAGVVPRLIQ 294

  Fly   239 LLEHPNVTVQNAALQALINIATGSEEQIQELLNNNLLPHLSALMSNS-DPDIRCQVLKLLLNIAD 302
            ||.|.:.:|...||:.:.||.||.:.|.|.:|:...||.|..|:.|: ...|:.:....:.||..
plant   295 LLGHSSPSVLIPALRTIGNIVTGDDLQTQMVLDQQALPCLLNLLKNNYKKSIKKEACWTISNITA 359

  Fly   303 GNIFQRHAIMNAGLLHKILECLKADAISLKSAAALTITTLAIDKDKNLLCYLMRQGVIPEFCNLL 367
            ||..|..|:::||::..::..|::....:|..||..|:........:.:.:::.||.|...|:||
plant   360 GNADQIQAVIDAGIIQSLVWVLQSAEFEVKKEAAWGISNATSGGTHDQIKFMVSQGCIKPLCDLL 424

  Fly   368 FCQERDILSNVLDILSTMLDVDPSFSAE-----------VSGIIEWSGALNNIRMLQSSEHEEIA 421
            .|.:..:::..|:.|..:|.|.   .||           .:.:|:.:..|..|..|||.::.:|.
plant   425 TCPDLKVVTVCLEALENILVVG---EAEKNLGHTGEDNLYAQMIDEAEGLEKIENLQSHDNNDIY 486

  Fly   422 AVARKIIGNYF 432
            ..|.||:..::
plant   487 DKAVKILETFW 497

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
alphaKap4NP_648007.1 ARM 57..177 CDD:237987 42/119 (35%)
armadillo repeat 98..134 CDD:293788 15/35 (43%)
armadillo repeat 140..176 CDD:293788 12/35 (34%)
ARM 189..301 CDD:237987 35/113 (31%)
armadillo repeat 192..217 CDD:293788 6/24 (25%)
armadillo repeat 224..260 CDD:293788 15/35 (43%)
armadillo repeat 266..300 CDD:293788 8/34 (24%)
ARM 276..385 CDD:237987 27/109 (25%)
armadillo repeat 308..342 CDD:293788 8/33 (24%)
armadillo repeat 350..383 CDD:293788 8/32 (25%)
Arm_3 400..>433 CDD:292804 10/33 (30%)
MOS6NP_192124.1 SRP1 10..529 CDD:227396 120/401 (30%)