DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaKap4 and IMPA-7

DIOPT Version :9

Sequence 1:NP_648007.1 Gene:alphaKap4 / 38675 FlyBaseID:FBgn0035657 Length:442 Species:Drosophila melanogaster
Sequence 2:NP_001319482.1 Gene:IMPA-7 / 819741 AraportID:AT3G05720 Length:528 Species:Arabidopsis thaliana


Alignment Length:396 Identity:113/396 - (28%)
Similarity:193/396 - (48%) Gaps:20/396 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 VNKLLKSNTIGNLVESLGHGNKNKIRADAADALAHIASGSSEHSNLIAKAGAVPRLIRLLQSPDP 119
            |.:::::..:...||.|...:..:::.:||.||.:||||:||::.::...|||..|:|||.||..
plant    96 VEEVIQAGLVPRFVEFLTWDDSPQLQFEAAWALTNIASGTSENTEVVIDHGAVAILVRLLNSPYD 160

  Fly   120 EVCEKGILSLGNLLHFAPNLRDYIIRHGLMQKLMSIIQDKSTCTLMLSHVTWVLRKLCISSQPSP 184
            .|.|:.:.:|||:...:|..||.::.|..:..|:..:...:..: ||.:..|.|..|| ..:|.|
plant   161 VVREQVVWALGNISGDSPRCRDIVLGHAALPSLLLQLNHGAKLS-MLVNAAWTLSNLC-RGKPQP 223

  Fly   185 P-DNAAEIIQALNIVLYNPEANVLEDALMAVRNLAHG-NETIQMLLDFEVVPRIIYLLEHPNVTV 247
            | |..:..:.||..::...:..:|.....|:..|:.| ||.||.:::..|..|:|.|..|.:.:|
plant   224 PFDQVSAALPALAQLIRLDDKELLAYTCWALVYLSDGSNEKIQAVIEANVCARLIGLSIHRSPSV 288

  Fly   248 QNAALQALINIATGSEEQIQELLNNNLLPHLSALMSNS-DPDIRCQVLKLLLNIADGNIFQRHAI 311
            ...||:.:.||.||::.|.|.:::...||.|..|:..| :..||.:....:.||..|...|..|:
plant   289 ITPALRTIGNIVTGNDSQTQHIIDLQALPCLVNLLRGSYNKTIRKEACWTVSNITAGCQSQIQAV 353

  Fly   312 MNAGLLHKILECLKADAISLKSAAALTITTLAIDKDKNLLCYLMRQGVIPEFCNLLFCQERDILS 376
            .:|.:...::..|:.....:|..||..|...........:.:|::|..|...|:||.|.:..::.
plant   354 FDADICPALVNLLQNSEGDVKKEAAWAICNAIAGGSYKQIMFLVKQECIKPLCDLLTCSDTQLVM 418

  Fly   377 NVLDILSTMLDVDPSFSA-EVSGI--------------IEWSGALNNIRMLQSSEHEEIAAVARK 426
            ..|:.|..:|.|...||: ...||              ||.:..|..|..|||.|:.:|...|.|
plant   419 VCLEALKKILKVGEVFSSRHAEGIYQCPQTNVNPHAQLIEEAEGLEKIEGLQSHENNDIYETAVK 483

  Fly   427 IIGNYF 432
            |:..|:
plant   484 ILETYW 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaKap4NP_648007.1 ARM 57..177 CDD:237987 36/119 (30%)
armadillo repeat 98..134 CDD:293788 14/35 (40%)
armadillo repeat 140..176 CDD:293788 8/35 (23%)
ARM 189..301 CDD:237987 32/113 (28%)
armadillo repeat 192..217 CDD:293788 4/24 (17%)
armadillo repeat 224..260 CDD:293788 12/35 (34%)
armadillo repeat 266..300 CDD:293788 8/34 (24%)
ARM 276..385 CDD:237987 26/109 (24%)
armadillo repeat 308..342 CDD:293788 7/33 (21%)
armadillo repeat 350..383 CDD:293788 8/32 (25%)
Arm_3 400..>433 CDD:292804 13/33 (39%)
IMPA-7NP_001319482.1 SRP1 24..489 CDD:227396 112/394 (28%)
armadillo repeat 62..86 CDD:293788
armadillo repeat 99..131 CDD:293788 7/31 (23%)
armadillo repeat 139..175 CDD:293788 14/35 (40%)
armadillo repeat 181..216 CDD:293788 8/35 (23%)
armadillo repeat 232..257 CDD:293788 4/24 (17%)
armadillo repeat 265..301 CDD:293788 12/35 (34%)
armadillo repeat 307..342 CDD:293788 8/34 (24%)
armadillo repeat 350..387 CDD:293788 7/36 (19%)
armadillo repeat 393..427 CDD:293788 9/33 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5064
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54553
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000157
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23316
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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