DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaKap4 and kpna3

DIOPT Version :9

Sequence 1:NP_648007.1 Gene:alphaKap4 / 38675 FlyBaseID:FBgn0035657 Length:442 Species:Drosophila melanogaster
Sequence 2:NP_001016060.1 Gene:kpna3 / 548814 XenbaseID:XB-GENE-953229 Length:521 Species:Xenopus tropicalis


Alignment Length:476 Identity:161/476 - (33%)
Similarity:252/476 - (52%) Gaps:48/476 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RKRRFLKKGQNLMMLR------TLRLEKAKKAE--LQK-------------------------EL 35
            |.:.|..||:::..:|      |:.|.|.|:.|  |:|                         |.
 Frog    11 RIKSFKNKGRDVETMRRHRNEVTVELRKNKRDEHLLKKRNVPQEESLEDSDVDGDFKSQNVTLEA 75

  Fly    36 TIYNALT------------KCKLTSSEVVPDVNKLLKSNTIGNLVESLGHGNKNKIRADAADALA 88
            .:.||.:            ..||.||:..|.::.|:||..:..||:.|...:...::.:||.||.
 Frog    76 ILQNATSDNPAIQLSAVQAARKLLSSDRNPPIDDLIKSGILPILVKCLEADDNPSLQFEAAWALT 140

  Fly    89 HIASGSSEHSNLIAKAGAVPRLIRLLQSPDPEVCEKGILSLGNLLHFAPNLRDYIIRHGLMQKLM 153
            :||||:|..:..:.::.|||..:|||.|....|||:.:.:|||::...|..|||:|..|:::.|:
 Frog   141 NIASGTSAQTQAVVQSNAVPLFLRLLHSLHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLL 205

  Fly   154 SIIQDKSTCTLMLSHVTWVLRKLCISSQPSPP-DNAAEIIQALNIVLYNPEANVLEDALMAVRNL 217
            |.|......| .|.:||||:..||.:..|.|| :...||:.||.:::|:.:.|:|.|.:.|:..|
 Frog   206 SFINPSIPIT-FLRNVTWVIVNLCRNKDPPPPMETVQEILPALCVLIYHTDINILVDTVWALSYL 269

  Fly   218 AH-GNETIQMLLDFEVVPRIIYLLEHPNVTVQNAALQALINIATGSEEQIQELLNNNLLPHLSAL 281
            .. |||.|||::|..|||.::.||.|..|.||.|||:|:.||.||::||.|.:||.::|.|...|
 Frog   270 TDGGNEQIQMVIDSGVVPFLVPLLSHQEVKVQTAALRAVGNIVTGTDEQTQVVLNCDVLSHFHNL 334

  Fly   282 MSNSDPDIRCQVLKLLLNIADGNIFQRHAIMNAGLLHKILECLKADAISLKSAAALTITTLAIDK 346
            :::....|..:.:..|.||..||..|..|:::|||:..|:..|.......:..||..|:.|.|..
 Frog   335 LTHPKEKINKEAVWFLSNITAGNQQQVQAVIDAGLIPMIIHQLAKGDFGTQKEAAWAISNLTISG 399

  Fly   347 DKNLLCYLMRQGVIPEFCNLLFCQERDILSNVLDILSTMLDVDPSFSAEVSGIIEWSGALNNIRM 411
            .|:.:.||::|.|||.||:||..::..::..|||.|..:|.:....::.::.|||..|.|..|..
 Frog   400 RKDQVEYLVQQNVIPPFCSLLSVKDSQVVQVVLDGLKNILIMAGDEASTIAEIIEECGGLEKIEA 464

  Fly   412 LQSSEHEEIAAVARKIIGNYF 432
            ||..|:|||..:|.:||..||
 Frog   465 LQQHENEEIYKLAFEIIDQYF 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaKap4NP_648007.1 ARM 57..177 CDD:237987 43/119 (36%)
armadillo repeat 98..134 CDD:293788 13/35 (37%)
armadillo repeat 140..176 CDD:293788 14/35 (40%)
ARM 189..301 CDD:237987 45/112 (40%)
armadillo repeat 192..217 CDD:293788 7/24 (29%)
armadillo repeat 224..260 CDD:293788 19/35 (54%)
armadillo repeat 266..300 CDD:293788 8/33 (24%)
ARM 276..385 CDD:237987 35/108 (32%)
armadillo repeat 308..342 CDD:293788 9/33 (27%)
armadillo repeat 350..383 CDD:293788 13/32 (41%)
Arm_3 400..>433 CDD:292804 16/33 (48%)
kpna3NP_001016060.1 SRP1 7..521 CDD:227396 161/476 (34%)
armadillo repeat 73..98 CDD:293788 3/24 (13%)
armadillo repeat 109..142 CDD:293788 10/32 (31%)
armadillo repeat 150..186 CDD:293788 13/35 (37%)
armadillo repeat 192..227 CDD:293788 14/35 (40%)
armadillo repeat 244..269 CDD:293788 7/24 (29%)
armadillo repeat 277..313 CDD:293788 19/35 (54%)
armadillo repeat 319..353 CDD:293788 8/33 (24%)
armadillo repeat 361..395 CDD:293788 9/33 (27%)
armadillo repeat 404..438 CDD:293788 14/33 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000157
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23316
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.100

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