DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaKap4 and kpna2

DIOPT Version :9

Sequence 1:NP_648007.1 Gene:alphaKap4 / 38675 FlyBaseID:FBgn0035657 Length:442 Species:Drosophila melanogaster
Sequence 2:XP_012821932.1 Gene:kpna2 / 493517 XenbaseID:XB-GENE-979796 Length:528 Species:Xenopus tropicalis


Alignment Length:444 Identity:135/444 - (30%)
Similarity:226/444 - (50%) Gaps:27/444 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KKGQNLMMLRTLRLEKAKKAELQKELTIYNALTKC--KLTSSEVVPDVNKLLKSNTIGNLVESLG 72
            :|.||........:|:..:......|.|....|:.  ||.|.|..|.:::::::..|..||..|.
 Frog    64 EKNQNGQTSTQWSVEEIVRGVASSSLEIQLQATQAARKLLSREREPPIDRIIQAGLIPKLVAFLA 128

  Fly    73 HGNKNKIRADAADALAHIASGSSEHSNLIAKAGAVPRLIRLLQSPDPEVCEKGILSLGNLLHFAP 137
            ..:.:.|:.:||.||.:||||:|:.:..:.:.|.||..|.||.||.|.:.|:.:.:|||:.....
 Frog   129 RTDCSPIQFEAAWALTNIASGTSDQTKAVVEGGGVPAFISLLASPHPHISEQAVWALGNIAGDGS 193

  Fly   138 NLRDYIIRHGLMQKLMSIIQDKSTCTL---MLSHVTWVLRKLCISSQPSPP-DNAAEIIQALNIV 198
            ..||.:|:||.:..|::::.|....||   .|.:|||.|..||.:..|:|| |...:|:..|..:
 Frog   194 AYRDLVIKHGAVGPLLALLADPDLSTLATGYLRNVTWTLSNLCRNKNPAPPLDAIQQILPTLVRL 258

  Fly   199 LYNPEANVLEDALMAVRNLAHG-NETIQMLLDFEVVPRIIYLLEHPNVTVQNAALQALINIATGS 262
            |::.:..||.|...||..|..| |:.|.:::...:||||:.||....:|:....|:.:.||.||:
 Frog   259 LHHDDREVLADTCWAVSYLTDGSNDRINVVVGTGLVPRIVQLLGCGELTIVTPCLRTVGNIVTGT 323

  Fly   263 EEQIQELLNNNLLPHLSALMSNSDPDIRCQVLKLLLNIADGNIFQRHAIMNAGLLHKILECL-KA 326
            :||.|.:|:...|...:.|:::...:|:.:....|.||..|...|...::|.||:..::|.| ||
 Frog   324 DEQTQVVLDAGALSVFAELLTHHKNNIQKEAAWTLSNITAGRQDQIQEVVNHGLIPYLIEILRKA 388

  Fly   327 DAISLKSAA-ALTITTL--AIDKDKNLLCYLMRQGVIPEFCNLLFCQERDILSNVLDILSTMLDV 388
            |..:.|.|. |:|..|.  .||:    :.||::..||....|||..::...:..:||..:.:.  
 Frog   389 DYKTQKEAIWAVTNYTSGGTIDQ----IIYLVQCSVIEPLSNLLSVKDSKTVLVILDAFTNVF-- 447

  Fly   389 DPSFSAEVSG-------IIEWSGALNNIRMLQSSEHEEIAAVARKIIGNYFPAK 435
               .:||..|       ::|..|.|:.|..|||.|:|::...:..:|..||.|:
 Frog   448 ---AAAEKLGETEKLCLMVEECGGLDRIEALQSHENEQVYKASAGLIEKYFSAE 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaKap4NP_648007.1 ARM 57..177 CDD:237987 41/122 (34%)
armadillo repeat 98..134 CDD:293788 13/35 (37%)
armadillo repeat 140..176 CDD:293788 14/38 (37%)
ARM 189..301 CDD:237987 33/112 (29%)
armadillo repeat 192..217 CDD:293788 7/24 (29%)
armadillo repeat 224..260 CDD:293788 11/35 (31%)
armadillo repeat 266..300 CDD:293788 6/33 (18%)
ARM 276..385 CDD:237987 31/112 (28%)
armadillo repeat 308..342 CDD:293788 12/35 (34%)
armadillo repeat 350..383 CDD:293788 9/32 (28%)
Arm_3 400..>433 CDD:292804 11/32 (34%)
kpna2XP_012821932.1 SRP1 20..516 CDD:227396 135/444 (30%)
armadillo repeat 114..146 CDD:293788 9/31 (29%)
armadillo repeat 154..190 CDD:293788 13/35 (37%)
armadillo repeat 196..235 CDD:293788 14/38 (37%)
armadillo repeat 252..277 CDD:293788 7/24 (29%)
armadillo repeat 285..321 CDD:293788 11/35 (31%)
armadillo repeat 327..361 CDD:293788 6/33 (18%)
armadillo repeat 369..403 CDD:293788 12/33 (36%)
armadillo repeat 412..446 CDD:293788 9/33 (27%)
armadillo repeat 459..494 CDD:293788 10/34 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000157
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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