DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alphaKap4 and Kpna7

DIOPT Version :9

Sequence 1:NP_648007.1 Gene:alphaKap4 / 38675 FlyBaseID:FBgn0035657 Length:442 Species:Drosophila melanogaster
Sequence 2:NP_001334460.1 Gene:Kpna7 / 381686 MGIID:2141165 Length:520 Species:Mus musculus


Alignment Length:508 Identity:116/508 - (22%)
Similarity:218/508 - (42%) Gaps:88/508 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 QKRKRRFLKKGQNLMMLR------TLRLEKAKKAE-------------------LQKELT----- 36
            ::|.:.:..:|:.:.:.|      :|:|.|.:|.|                   |.||:.     
Mouse     8 KERLKNYKYRGKEMSLPRQQRIASSLQLRKTRKDEQVLKRRNIDLFSSDMVSQALVKEVNFTLDD 72

  Fly    37 IYNALTKC-------------KLTSSEVVPDVNKLLKSNTIGNLVESLGHGNKNKIRADAADALA 88
            |..|:...             ::.|.|..|.:|.::::..|..||:.|......|::.:||..|.
Mouse    73 IIQAVNSSDPILHFRATRAAREMISQENTPPLNLIIEAGLIPKLVDFLKATPHPKLQFEAAWVLT 137

  Fly    89 HIASGSSEHSNLIAKAGAVPRLIRLLQSPDPEVCEKGILSLGNLLH----------FAPN----- 138
            :||||:||.:..:.|.||:..||.||.||...|.|:.:.:|||:..          |.|:     
Mouse   138 NIASGTSEQTRAVVKEGAIQPLIELLCSPHLTVSEQAVWALGNIADRKMPDTQVQIFTPSTREAK 202

  Fly   139 ------LRDYIIRHGLMQKLMSIIQDKSTCTLMLSHVTWVLRKLCISSQPSPPDNAA-EIIQALN 196
                  .||.:|.:..:..|:::| .|......|.:::|.|..||.:..|.|.::|. :::..|.
Mouse   203 AGDCAEFRDCVISNNAIPHLINLI-SKGIPITFLRNISWTLSNLCRNKDPYPSESAVRQMLPPLC 266

  Fly   197 IVLYNPEANVLEDALMAVRNLAH-GNETIQMLLDFEVVPRIIYLLEHPNVTVQNAALQALINIAT 260
            .:|.:.:..:|.|...|:..|.. |.|.|..::...::||::.|:....:::....|..:.||..
Mouse   267 QLLLHRDNEILADTCWALSYLTKGGKEYIHHVVTTGILPRLVELMTSSELSISIPCLHTIGNIVA 331

  Fly   261 GSEEQIQELLNNNLLPHLSALMSNSDPDIRCQVLKLLLNIADGNIFQRHAI--MNAGLLHKILEC 323
            |::||.|..::..:|..|..::.:....|:......:.|:|.|   .||.:  :...||..:::.
Mouse   332 GTDEQTQMAIDAGMLKVLGQVLKHPKTSIQVLAAWTMSNVAAG---PRHQVEQLLCNLLPILVDL 393

  Fly   324 LKADAISLKSAAALTITTLAIDKDKNLLCYLMRQGVIPEFCNLLFCQERDILSNVLDILSTMLDV 388
            |:...:.::.....|:..:|....::.|..|...|::....:||...:.:::..||||:|.:|. 
Mouse   394 LRNAELKVQKEVVCTVINIATGASQDQLTLLAHSGILEPMLSLLSAPDLEVVIIVLDIISYLLQ- 457

  Fly   389 DPSFSAEVSGI---------IEWSGALNNIRMLQSSEHEEIAAVARKIIGNYF 432
                  .:..:         ||..|....|..||...:..|:..|..||..||
Mouse   458 ------HIDNLQEKKRLYFQIEKFGGFEKIECLQHHHNISISNSALDIIEKYF 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaKap4NP_648007.1 ARM 57..177 CDD:237987 39/140 (28%)
armadillo repeat 98..134 CDD:293788 14/35 (40%)
armadillo repeat 140..176 CDD:293788 9/35 (26%)
ARM 189..301 CDD:237987 23/113 (20%)
armadillo repeat 192..217 CDD:293788 5/24 (21%)
armadillo repeat 224..260 CDD:293788 7/35 (20%)
armadillo repeat 266..300 CDD:293788 4/33 (12%)
ARM 276..385 CDD:237987 22/110 (20%)
armadillo repeat 308..342 CDD:293788 6/35 (17%)
armadillo repeat 350..383 CDD:293788 9/32 (28%)
Arm_3 400..>433 CDD:292804 12/33 (36%)
Kpna7NP_001334460.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5064
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54553
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000157
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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