DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaKap4 and kpna3

DIOPT Version :9

Sequence 1:NP_648007.1 Gene:alphaKap4 / 38675 FlyBaseID:FBgn0035657 Length:442 Species:Drosophila melanogaster
Sequence 2:NP_958477.2 Gene:kpna3 / 368640 ZFINID:ZDB-GENE-030616-541 Length:520 Species:Danio rerio


Alignment Length:424 Identity:157/424 - (37%)
Similarity:243/424 - (57%) Gaps:7/424 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 KGQNLMMLRTLRLEKAKKAELQKELTIYNALTKCKLTSSEVVPDVNKLLKSNTIGNLVESLGHGN 75
            ||||:.:...|:...:..|.:|  |:...|..  ||.||:..|.::.|:|...:..||:.|...:
Zfish    67 KGQNVTLDAILQNATSDNAVVQ--LSAVQAAR--KLLSSDRNPPIDDLIKCGILPILVKCLERDD 127

  Fly    76 KNKIRADAADALAHIASGSSEHSNLIAKAGAVPRLIRLLQSPDPEVCEKGILSLGNLLHFAPNLR 140
            ...::.:||.||.:||||:|..:..:.|:.|||..:|||.||...|||:.:.:|||::...|..|
Zfish   128 NPSLQFEAAWALTNIASGTSAQTQAVVKSNAVPLFLRLLHSPHQNVCEQAVWALGNIIGDGPQCR 192

  Fly   141 DYIIRHGLMQKLMSIIQDKSTCTLMLSHVTWVLRKLCISSQPSPP-DNAAEIIQALNIVLYNPEA 204
            ||:|..|:::.|:|.|......| .|.:||||:..||.:..|.|| :...||:.||.:::|:.:.
Zfish   193 DYVISLGVVKPLLSFINPSIPIT-FLRNVTWVIVNLCRNKDPPPPMETVQEILPALCVLIYHTDI 256

  Fly   205 NVLEDALMAVRNLAH-GNETIQMLLDFEVVPRIIYLLEHPNVTVQNAALQALINIATGSEEQIQE 268
            |:|.|.:.|:..|.. |||.|||::|..|||.::.||.|..|.||.|||:|:.||.||::||.|.
Zfish   257 NILVDTVWALSYLTDGGNEQIQMVIDSGVVPYLVPLLSHQEVKVQTAALRAVGNIVTGTDEQTQV 321

  Fly   269 LLNNNLLPHLSALMSNSDPDIRCQVLKLLLNIADGNIFQRHAIMNAGLLHKILECLKADAISLKS 333
            :||.::|.|.|.|:::....|..:.:..|.||..||..|..|:::|||:..|:..|.......:.
Zfish   322 VLNCDVLTHFSTLLTHPKEKINKEAVWFLSNITAGNQQQVQAVIDAGLIPMIIHQLAKGDFGTQK 386

  Fly   334 AAALTITTLAIDKDKNLLCYLMRQGVIPEFCNLLFCQERDILSNVLDILSTMLDVDPSFSAEVSG 398
            .||..|:.|.|...|:.:.||::|.|||.|||||..::..::..|||.|..:|.:....::.::.
Zfish   387 EAAWAISNLTISGRKDQVEYLVQQNVIPPFCNLLSVKDSQVVQVVLDGLKNILIMAGEEASTIAE 451

  Fly   399 IIEWSGALNNIRMLQSSEHEEIAAVARKIIGNYF 432
            |||..|.|..|..||..|:|:|..:|.:||..||
Zfish   452 IIEECGGLEKIENLQQHENEDIYKLAFEIIDQYF 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaKap4NP_648007.1 ARM 57..177 CDD:237987 44/119 (37%)
armadillo repeat 98..134 CDD:293788 15/35 (43%)
armadillo repeat 140..176 CDD:293788 14/35 (40%)
ARM 189..301 CDD:237987 46/112 (41%)
armadillo repeat 192..217 CDD:293788 7/24 (29%)
armadillo repeat 224..260 CDD:293788 19/35 (54%)
armadillo repeat 266..300 CDD:293788 9/33 (27%)
ARM 276..385 CDD:237987 37/108 (34%)
armadillo repeat 308..342 CDD:293788 9/33 (27%)
armadillo repeat 350..383 CDD:293788 14/32 (44%)
Arm_3 400..>433 CDD:292804 15/33 (45%)
kpna3NP_958477.2 SRP1 2..519 CDD:227396 157/424 (37%)
IBB 9..93 CDD:280005 8/27 (30%)
HEAT repeat 73..104 CDD:293787 9/34 (26%)
ARM 108..229 CDD:237987 45/121 (37%)
armadillo repeat 109..142 CDD:293788 9/32 (28%)
armadillo repeat 150..186 CDD:293788 15/35 (43%)
armadillo repeat 192..227 CDD:293788 14/35 (40%)
ARM 242..355 CDD:237987 47/112 (42%)
armadillo repeat 244..269 CDD:293788 7/24 (29%)
armadillo repeat 277..313 CDD:293788 19/35 (54%)
armadillo repeat 319..353 CDD:293788 9/33 (27%)
armadillo repeat 361..395 CDD:293788 9/33 (27%)
ARM 362..486 CDD:237987 44/124 (35%)
armadillo repeat 404..438 CDD:293788 15/33 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170576826
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5064
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54553
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000157
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23316
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
87.810

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