DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaKap4 and kpna4

DIOPT Version :9

Sequence 1:NP_648007.1 Gene:alphaKap4 / 38675 FlyBaseID:FBgn0035657 Length:442 Species:Drosophila melanogaster
Sequence 2:NP_958462.1 Gene:kpna4 / 327373 ZFINID:ZDB-GENE-030131-5584 Length:521 Species:Danio rerio


Alignment Length:480 Identity:160/480 - (33%)
Similarity:250/480 - (52%) Gaps:52/480 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 QKRKRRFLKKGQNLMMLRTLRLEKAKKAELQK--------------------------------- 33
            ::|.:.|..||::|..:|..|.|..  .||:|                                 
Zfish     9 KQRLKNFKNKGRDLETMRRQRTEVV--VELRKNKRDEHLLKRRNVPHEDICDDSDADGDFRSQNT 71

  Fly    34 --ELTIYNALT------------KCKLTSSEVVPDVNKLLKSNTIGNLVESLGHGNKNKIRADAA 84
              |..:.||.:            ..||.||:..|.::.|:||..:..||..|...:...::.:||
Zfish    72 SLEAIVQNATSDNQGIQLSAVQAARKLLSSDRNPPIDDLIKSGILPILVHCLDRDDNPSLQFEAA 136

  Fly    85 DALAHIASGSSEHSNLIAKAGAVPRLIRLLQSPDPEVCEKGILSLGNLLHFAPNLRDYIIRHGLM 149
            .||.:||||:||.:..:.::.|||..:|||.||...|||:.:.:|||::...|..|||:|..|::
Zfish   137 WALTNIASGTSEQTQAVVQSNAVPLFLRLLHSPHQNVCEQAVWALGNIIGDGPQCRDYVISLGVV 201

  Fly   150 QKLMSIIQDKSTCTLMLSHVTWVLRKLCISSQPSPP-DNAAEIIQALNIVLYNPEANVLEDALMA 213
            :.|:|.|......| .|.:||||:..||....|.|| :...||:.||.:::::.:.|:|.|.:.|
Zfish   202 KPLLSFISPSIPIT-FLRNVTWVMVNLCRHKDPPPPMETIQEILPALCVLIHHTDVNILVDTVWA 265

  Fly   214 VRNLAH-GNETIQMLLDFEVVPRIIYLLEHPNVTVQNAALQALINIATGSEEQIQELLNNNLLPH 277
            :..|.. |||.|||::|..:||.::.||.|..|.||.|||:|:.||.||::||.|.:||.:.|.|
Zfish   266 LSYLTDAGNEQIQMVIDSGIVPYLVPLLSHQEVKVQTAALRAVGNIVTGTDEQTQVVLNCDALGH 330

  Fly   278 LSALMSNSDPDIRCQVLKLLLNIADGNIFQRHAIMNAGLLHKILECLKADAISLKSAAALTITTL 342
            ..||:::....|..:.:..|.||..||..|..|:::|.|:..|:..|.......:..||..|:.|
Zfish   331 FPALLTHPKEKINKEAVWFLSNITAGNQQQVQAVIDANLVPMIILLLDKGDFGTQKEAAWAISNL 395

  Fly   343 AIDKDKNLLCYLMRQGVIPEFCNLLFCQERDILSNVLDILSTMLDVDPSFSAEVSGIIEWSGALN 407
            .|...|:.:.||::|.|||.|||||..::..::..|||.||.:|.:....:..|:.:||..|.|.
Zfish   396 TISGRKDQVAYLIQQQVIPPFCNLLTVKDAQVVQVVLDGLSNILKMADDEAETVANLIEECGGLE 460

  Fly   408 NIRMLQSSEHEEIAAVARKIIGNYF 432
            .|..||:.|:|:|..:|.:||..:|
Zfish   461 KIEQLQNHENEDIYKLAYEIIDQFF 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaKap4NP_648007.1 ARM 57..177 CDD:237987 45/119 (38%)
armadillo repeat 98..134 CDD:293788 14/35 (40%)
armadillo repeat 140..176 CDD:293788 14/35 (40%)
ARM 189..301 CDD:237987 44/112 (39%)
armadillo repeat 192..217 CDD:293788 6/24 (25%)
armadillo repeat 224..260 CDD:293788 18/35 (51%)
armadillo repeat 266..300 CDD:293788 9/33 (27%)
ARM 276..385 CDD:237987 37/108 (34%)
armadillo repeat 308..342 CDD:293788 8/33 (24%)
armadillo repeat 350..383 CDD:293788 14/32 (44%)
Arm_3 400..>433 CDD:292804 14/33 (42%)
kpna4NP_958462.1 SRP1 2..520 CDD:227396 160/480 (33%)
IBB 10..93 CDD:280005 14/84 (17%)
armadillo repeat 73..98 CDD:293788 3/24 (13%)
ARM 108..229 CDD:237987 46/121 (38%)
armadillo repeat 109..142 CDD:293788 10/32 (31%)
armadillo repeat 150..186 CDD:293788 14/35 (40%)
armadillo repeat 192..227 CDD:293788 14/35 (40%)
ARM 242..355 CDD:237987 45/112 (40%)
armadillo repeat 244..269 CDD:293788 6/24 (25%)
armadillo repeat 279..311 CDD:293788 14/31 (45%)
armadillo repeat 319..355 CDD:293788 11/35 (31%)
armadillo repeat 361..395 CDD:293788 8/33 (24%)
ARM 362..486 CDD:237987 43/124 (35%)
armadillo repeat 404..438 CDD:293788 16/33 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170576828
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54553
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000157
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23316
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
65.910

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