DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaKap4 and AT5G49305

DIOPT Version :9

Sequence 1:NP_648007.1 Gene:alphaKap4 / 38675 FlyBaseID:FBgn0035657 Length:442 Species:Drosophila melanogaster
Sequence 2:NP_001331293.1 Gene:AT5G49305 / 28721258 AraportID:AT5G49305 Length:384 Species:Arabidopsis thaliana


Alignment Length:381 Identity:93/381 - (24%)
Similarity:164/381 - (43%) Gaps:56/381 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 LLKSNTIGNLVESLGHGNKNKIRADAADALAHIASGSSEHSNLIAKAGAVPRLIRLLQSPDPEVC 122
            |::|..:...|..|.:....|::.:||..||.||:...:   ::.....||.|:.||.|....|.
plant    41 LIRSGIVARFVFLLHNEEFPKLQFEAARGLAIIAAFKPD---VVVDHKVVPILVTLLASSTDNVR 102

  Fly   123 EKGILSLGNLLHFAPNLRDYIIRHGLMQKLMSIIQDKSTCTLMLSHVTWVLRKLCISSQPSPPDN 187
            .:.||:|||:. :.|..|||:::.|.:..|: |...|.|...||......|..||   :..||..
plant   103 GQAILALGNVA-YHPIHRDYVLQCGALTPLL-IRLYKDTNLPMLRAAIRTLAFLC---RGMPPST 162

  Fly   188 AAEIIQALNIVLYNPEANVLEDALMAVRNLAHGN-ETIQMLLDFEVVPRIIYLLEHPNVTVQNAA 251
            ..|:..||.|.|.:.:..:|....:|:.:|.:|: :.||.::....||:::.:|..|:..:....
plant   163 FNEVKPALEIHLNSSDKEILRYVCLAISHLCYGSVDGIQRVIQAGFVPKLVSVLRRPSPVLSAPE 227

  Fly   252 LQALINIATGSEEQIQELLNNNLLPHLSALMSNSDPDIRCQVLKLLLNIADGNIFQRHAIMNAGL 316
            |:.:..:.||:..|.|.|::.||:|....|..|::.||:.:.::::|....|.            
plant   228 LRTIGTLVTGNNHQSQLLIDANLIPSSVNLALNAELDIKREAVRVILRATVGG------------ 280

  Fly   317 LHKILECLKADAISLKSAAALTITTLAIDKDKNLLCYLMRQGVIPEFCNLLFCQERDILSNVLDI 381
                                          ..|.:.||::||.....|:||.|.:..|:...|..
plant   281 ------------------------------SPNQIKYLVQQGCTKLLCDLLVCPDIMIIKLCLYG 315

  Fly   382 LSTMLDVDPSFS--AEVS---GIIEWSGALNNIRMLQSSEHEEIAAVARKIIGNYF 432
            |..:|....|..  .:|:   .:|:.:..:..|:.|...|..||...|..|:..|:
plant   316 LKNILKAGESEKNRGDVNYYRQLIDAAEGVKKIKNLLKHERNEIYDKALNILETYW 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaKap4NP_648007.1 ARM 57..177 CDD:237987 35/118 (30%)
armadillo repeat 98..134 CDD:293788 12/35 (34%)
armadillo repeat 140..176 CDD:293788 11/35 (31%)
ARM 189..301 CDD:237987 29/112 (26%)
armadillo repeat 192..217 CDD:293788 6/24 (25%)
armadillo repeat 224..260 CDD:293788 7/35 (20%)
armadillo repeat 266..300 CDD:293788 10/33 (30%)
ARM 276..385 CDD:237987 19/108 (18%)
armadillo repeat 308..342 CDD:293788 0/33 (0%)
armadillo repeat 350..383 CDD:293788 10/32 (31%)
Arm_3 400..>433 CDD:292804 9/33 (27%)
AT5G49305NP_001331293.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 58 1.000 Domainoid score I3982
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54553
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000157
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23316
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

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