DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaKap4 and cut15

DIOPT Version :9

Sequence 1:NP_648007.1 Gene:alphaKap4 / 38675 FlyBaseID:FBgn0035657 Length:442 Species:Drosophila melanogaster
Sequence 2:NP_587868.1 Gene:cut15 / 2539426 PomBaseID:SPCC962.03c Length:542 Species:Schizosaccharomyces pombe


Alignment Length:469 Identity:138/469 - (29%)
Similarity:244/469 - (52%) Gaps:35/469 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 QKRKRRFLKKGQNLMMLR-----TLRLEKAKKAELQKELTIYNALTKC----------------K 45
            |||:.. |.|.:||:.::     |:.||:.|:.:|:.||.:.:.|...                |
pombe    41 QKREEN-LNKRRNLVDVQEPAEETIPLEQDKENDLELELQLPDLLKALYSDDIEAQIQATAKFRK 104

  Fly    46 LTSSEVVPDVNKLLKSNTIGNLVESLGHGNKNKIRADAADALAHIASGSSEHSNLIAKAGAVPRL 110
            ..|.|..|.:.|::.:..:...||.|.|.| |.::.:|:.||.::|||||..::::.:|.|||..
pombe   105 ALSKETNPPIQKVIDAGVVPRFVEFLSHEN-NLLKFEASWALTNVASGSSNQTHVVVEANAVPVF 168

  Fly   111 IRLLQSPDPEVCEKGILSLGNLLHFAPNLRDYIIRHGLMQKLMSIIQDKSTCTLMLSHVTWVLRK 175
            :.||.|.:.:|.|:.:.:|||:...:|..||::::.|:::.|::||:.....: ||.:.||.|..
pombe   169 VSLLSSSEQDVREQAVWALGNIAGDSPMCRDHVLQCGVLEPLLNIIESNRRLS-MLRNSTWTLSN 232

  Fly   176 LCISSQPSPPDNA-AEIIQALNIVLYNPEANVLEDALMAVRNLAHG-NETIQMLLDFEVVPRIIY 238
            :|....|.|..|: :::|..|:.::|..:.:||.|||.|:..|:.| ||.||.::|..:..|::.
pombe   233 MCRGKNPQPDWNSISQVIPVLSKLIYTLDEDVLVDALWAISYLSDGANEKIQAIIDAGIPRRLVE 297

  Fly   239 LLEHPNVTVQNAALQALINIATGSEEQIQELLNNNLLPHLSALMSNSDPDIRCQVLKLLLNIADG 303
            ||.||:..||..||:::.||.||.:.|.|.::|...|..|.:|:|:....:|.:....:.||..|
pombe   298 LLMHPSAQVQTPALRSVGNIVTGDDVQTQVIINCGALSALLSLLSSPRDGVRKEACWTISNITAG 362

  Fly   304 NIFQRHAIMNAGLLHKILECLKADAISLKSAA--ALTITTLAIDKDKNLLCYLMRQGVIPEFCNL 366
            |..|...::.|.::..::..|......::..|  |::..|....:..:.:.||:.||.|...|||
pombe   363 NSSQIQYVIEANIIPPLIHLLTTADFKIQKEACWAISNATSGGARRPDQIRYLVEQGAIKPLCNL 427

  Fly   367 LFCQERDILSNVLDILSTMLDV-------DPSFSAEVSGIIEWSGALNNIRMLQSSEHEEIAAVA 424
            |.||:..|:...||.:..:|.|       :|......:..:|.:|.::.|...|:|.:.||...|
pombe   428 LACQDNKIIQVALDGIENILRVGELDRANNPDKINLYAVYVEDAGGMDLIHECQNSSNSEIYQKA 492

  Fly   425 RKIIGNYFPAKPHI 438
            ..||..:|..:..|
pombe   493 YNIIEKFFGEEDEI 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaKap4NP_648007.1 ARM 57..177 CDD:237987 39/119 (33%)
armadillo repeat 98..134 CDD:293788 12/35 (34%)
armadillo repeat 140..176 CDD:293788 11/35 (31%)
ARM 189..301 CDD:237987 38/112 (34%)
armadillo repeat 192..217 CDD:293788 9/24 (38%)
armadillo repeat 224..260 CDD:293788 14/35 (40%)
armadillo repeat 266..300 CDD:293788 7/33 (21%)
ARM 276..385 CDD:237987 28/110 (25%)
armadillo repeat 308..342 CDD:293788 4/35 (11%)
armadillo repeat 350..383 CDD:293788 14/32 (44%)
Arm_3 400..>433 CDD:292804 10/32 (31%)
cut15NP_587868.1 SRP1 3..531 CDD:227396 138/469 (29%)
IBB 8..99 CDD:280005 15/58 (26%)
armadillo repeat 73..106 CDD:293788 5/32 (16%)
ARM 115..235 CDD:237987 39/121 (32%)
armadillo repeat 116..148 CDD:293788 10/32 (31%)
armadillo repeat 156..192 CDD:293788 12/35 (34%)
armadillo repeat 198..233 CDD:293788 11/35 (31%)
ARM 199..319 CDD:237987 41/120 (34%)
armadillo repeat 250..275 CDD:293788 9/24 (38%)
armadillo repeat 283..361 CDD:293788 26/77 (34%)
ARM 344..446 CDD:237987 25/101 (25%)
armadillo repeat 367..400 CDD:293788 4/32 (13%)
armadillo repeat 412..446 CDD:293788 14/33 (42%)
Arm_3 462..>501 CDD:292804 10/38 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5064
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54553
OrthoFinder 1 1.000 - - FOG0000157
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23316
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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