DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaKap4 and ima-3

DIOPT Version :9

Sequence 1:NP_648007.1 Gene:alphaKap4 / 38675 FlyBaseID:FBgn0035657 Length:442 Species:Drosophila melanogaster
Sequence 2:NP_501227.1 Gene:ima-3 / 177533 WormBaseID:WBGene00002074 Length:514 Species:Caenorhabditis elegans


Alignment Length:421 Identity:135/421 - (32%)
Similarity:235/421 - (55%) Gaps:9/421 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 NLMMLRTLRLEKAKKAELQKELTIYNALTKCKLTSSEVVPDVNKLLKSNTIGNLVESLGHGNKNK 78
            ||:.|.....:.:..||   :||......  |:.|::..|.::.|:.|..:..||:.|...:.| 
 Worm    65 NLLRLTVAAAQSSDPAE---QLTAVQQAR--KMLSTDRNPPIDDLIGSGILPVLVQCLSSTDPN- 123

  Fly    79 IRADAADALAHIASGSSEHSNLIAKAGAVPRLIRLLQSPDPEVCEKGILSLGNLLHFAPNLRDYI 143
            ::.:||.||.:||||:||.:..:..|||||..::||...:..|||:.:.:|||::...|:.|||.
 Worm   124 LQFEAAWALTNIASGTSEQTQAVVNAGAVPLFLQLLSCGNLNVCEQSVWALGNIIGDGPHFRDYC 188

  Fly   144 IRHGLMQKLMSIIQDKSTCTLMLSHVTWVLRKLCISSQPSP-PDNAAEIIQALNIVLYNPEANVL 207
            :..|::|.|:..|..:.... .|.:||||:..||....|:| |.....|:.||::::::.:.|:|
 Worm   189 LELGILQPLLQFINPEIPIG-FLRNVTWVIVNLCRCKDPAPSPAVVRTILPALSLLIHHQDTNIL 252

  Fly   208 EDALMAVRNLAH-GNETIQMLLDFEVVPRIIYLLEHPNVTVQNAALQALINIATGSEEQIQELLN 271
            .|.:.|:..|.. |||.|||:::.:||..::.||.|.:|.||.|||:|:.||.||::||.|.:|:
 Worm   253 IDTVWALSYLTDGGNEHIQMVIEAQVVTHLVPLLGHVDVKVQTAALRAVGNIVTGTDEQTQLVLD 317

  Fly   272 NNLLPHLSALMSNSDPDIRCQVLKLLLNIADGNIFQRHAIMNAGLLHKILECLKADAISLKSAAA 336
            :.:|..:..|:::....|..:.:..:.||..||..|...:.:||::..|:..|.......:..||
 Worm   318 SGVLRFMPGLLAHYKEKINKEAVWFVSNITAGNQQQVQDVFDAGIMPMIIHLLDRGDFPTQKEAA 382

  Fly   337 LTITTLAIDKDKNLLCYLMRQGVIPEFCNLLFCQERDILSNVLDILSTMLDVDPSFSAEVSGIIE 401
            ..|:.:.|....|.:..:::.||:..||.:|.|.:..|:..|||.::.:|.:....:.:|:..||
 Worm   383 WAISNVTISGRPNQVEQMVKLGVLRPFCAMLSCTDSQIIQVVLDGINNILKMAGEAAEQVTSEIE 447

  Fly   402 WSGALNNIRMLQSSEHEEIAAVARKIIGNYF 432
            ..|.|:.|..||:.|:|:|..:|.:||.|:|
 Worm   448 ECGGLDKIENLQNHENEDIYKLAFEIIDNFF 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaKap4NP_648007.1 ARM 57..177 CDD:237987 42/119 (35%)
armadillo repeat 98..134 CDD:293788 13/35 (37%)
armadillo repeat 140..176 CDD:293788 12/35 (34%)
ARM 189..301 CDD:237987 38/112 (34%)
armadillo repeat 192..217 CDD:293788 6/24 (25%)
armadillo repeat 224..260 CDD:293788 17/35 (49%)
armadillo repeat 266..300 CDD:293788 5/33 (15%)
ARM 276..385 CDD:237987 26/108 (24%)
armadillo repeat 308..342 CDD:293788 7/33 (21%)
armadillo repeat 350..383 CDD:293788 10/32 (31%)
Arm_3 400..>433 CDD:292804 15/33 (45%)
ima-3NP_501227.1 IBB 4..87 CDD:280005 7/24 (29%)
SRP1 19..513 CDD:227396 135/421 (32%)
HEAT repeat 65..92 CDD:293787 7/31 (23%)
ARM 102..222 CDD:237987 43/121 (36%)
armadillo repeat 103..135 CDD:293788 10/32 (31%)
armadillo repeat 143..179 CDD:293788 13/35 (37%)
armadillo repeat 185..220 CDD:293788 12/35 (34%)
ARM 236..348 CDD:237987 39/111 (35%)
armadillo repeat 237..262 CDD:293788 6/24 (25%)
armadillo repeat 272..304 CDD:293788 13/31 (42%)
armadillo repeat 315..346 CDD:293788 4/30 (13%)
armadillo repeat 354..391 CDD:293788 7/36 (19%)
ARM 355..479 CDD:237987 36/124 (29%)
armadillo repeat 397..431 CDD:293788 10/33 (30%)
armadillo repeat 443..476 CDD:293788 13/32 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157904
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5064
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54553
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000157
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23316
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.850

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