DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaKap4 and ima-2

DIOPT Version :9

Sequence 1:NP_648007.1 Gene:alphaKap4 / 38675 FlyBaseID:FBgn0035657 Length:442 Species:Drosophila melanogaster
Sequence 2:NP_491824.1 Gene:ima-2 / 172329 WormBaseID:WBGene00002073 Length:531 Species:Caenorhabditis elegans


Alignment Length:477 Identity:119/477 - (24%)
Similarity:222/477 - (46%) Gaps:70/477 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KKGQNLMMLR------------TLRLEKAKKAELQKELT---------------IYNALTKC--- 44
            :||.::||.|            ...||:.:|...|:..|               ..:.:.:|   
 Worm    48 QKGADMMMKRRNIVDVDEGGNSESELEEPEKISHQQSSTRLSNDEIRAILSNNPSEDDMVRCFES 112

  Fly    45 --KLTSSEVVPDVNKLLKSNTIGNLVESLGHGNKNKIRADAADALAHIASGSSEHSNLIAKAGAV 107
              |..|....|.:::::....:..||::|...|: :::.:||.||.:|.|||:|.:....:||..
 Worm   113 LRKSLSKTKNPPIDEVIHCGLLQALVQALSVENE-RVQYEAAWALTNIVSGSTEQTIAAVEAGVT 176

  Fly   108 PRLIRLLQSPDPEVCEKGILSLGNLLHFAPNLRDYIIR-HGLMQKLMSIIQDKSTCTLMLSHV-- 169
            ..||.|......::.|:.:.::.|:...:..||||:|: || ::.||.:::  ....|..|||  
 Worm   177 IPLIHLSVHQSAQISEQALWAVANIAGDSSQLRDYVIKCHG-VEALMHLME--KVDQLGDSHVRT 238

  Fly   170 -TWVLRKLCISSQPSPPDNAAEIIQALN----IVLYNPEANVLEDALMAVRNLAHG-NETIQMLL 228
             .|....:|....|..|   .|:::.|:    .::.:.:..|.:||..||..|..| :|.|::..
 Worm   239 IAWAFSNMCRHKNPHAP---LEVLRVLSKGLVKLVQHTDRQVRQDACWAVSYLTDGPDEQIELAR 300

  Fly   229 DFEVVPRII-YLLEHPNVTVQNAALQALINIATGSEEQIQELLN----NNLLPHLSALMSNSDPD 288
            :..|:|.:: :..|..|:..  .||:.|.|:|||::...|.:::    :.:||.:....|:|   
 Worm   301 ESGVLPHVVAFFKEAENLVA--PALRTLGNVATGNDSLTQAVIDLGSLDEILPLMEKTRSSS--- 360

  Fly   289 IRCQVLK----LLLNIADGNIFQRHAIMNAGLLHKILECLKADAISLKSAAALTITTLAIDKDKN 349
                ::|    |:.||..|...|..|:::|.||..::..||:.....:..|:..::.||......
 Worm   361 ----IVKECCWLVSNIIAGTQKQIQAVLDANLLPVLINVLKSGDHKCQFEASWALSNLAQGGTNR 421

  Fly   350 LLCYLMRQGVIPEFCNLLFCQERDILSNVLDILST-MLDVDPSFSAEVSGI---IEWSGALNNIR 410
            .:..::...|:|..|..|.....|:|:|.|:.|.| ||.|...:..:|..:   :|.:|.|:::.
 Worm   422 QVVAMLEDNVVPALCQALLQTNTDMLNNTLETLYTLMLTVQNGYPHKVDILHDQVEENGGLDSLE 486

  Fly   411 MLQSSEHEEIAAVARKIIGNYF 432
            .||.|:.|:|...|.:||..:|
 Worm   487 RLQESQSEQIYTQAYRIITQFF 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaKap4NP_648007.1 ARM 57..177 CDD:237987 34/123 (28%)
armadillo repeat 98..134 CDD:293788 7/35 (20%)
armadillo repeat 140..176 CDD:293788 13/39 (33%)
ARM 189..301 CDD:237987 30/125 (24%)
armadillo repeat 192..217 CDD:293788 6/28 (21%)
armadillo repeat 224..260 CDD:293788 9/36 (25%)
armadillo repeat 266..300 CDD:293788 7/41 (17%)
ARM 276..385 CDD:237987 28/113 (25%)
armadillo repeat 308..342 CDD:293788 7/33 (21%)
armadillo repeat 350..383 CDD:293788 8/32 (25%)
Arm_3 400..>433 CDD:292804 12/33 (36%)
ima-2NP_491824.1 SRP1 21..522 CDD:227396 119/477 (25%)
IBB 21..103 CDD:280005 10/54 (19%)
ARM 126..248 CDD:237987 34/125 (27%)
armadillo repeat 128..159 CDD:293788 8/31 (26%)
armadillo repeat 167..203 CDD:293788 7/35 (20%)
armadillo repeat 209..246 CDD:293788 13/39 (33%)
ARM 266..374 CDD:237987 29/116 (25%)
armadillo repeat 296..331 CDD:293788 9/36 (25%)
armadillo repeat 337..372 CDD:293788 7/41 (17%)
ARM 338..454 CDD:237987 28/122 (23%)
armadillo repeat 380..416 CDD:293788 8/35 (23%)
armadillo repeat 423..454 CDD:293788 8/30 (27%)
Arm_3 470..517 CDD:292804 12/39 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5064
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54553
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000157
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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