DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaKap4 and Kpna4

DIOPT Version :10

Sequence 1:NP_648007.1 Gene:alphaKap4 / 38675 FlyBaseID:FBgn0035657 Length:442 Species:Drosophila melanogaster
Sequence 2:NP_032493.1 Gene:Kpna4 / 16649 MGIID:1100848 Length:521 Species:Mus musculus


Alignment Length:487 Identity:83/487 - (17%)
Similarity:154/487 - (31%) Gaps:180/487 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 WF--PPSPEPFPSIM--------------------ELLQDPMTAEIENFD--------------- 41
            |:  .|.|:.||.::                    :|.|...|..|.|..               
Mouse    60 WYFGHPYPQLFPPVVLKSRTDIVHESYKGRTKLLGDLTQKNCTLLISNIGVEHSGKYYFRADLGG 124

  Fly    42 -GIFSSPAISEAIPSTNTQPSVFPCPE----------SSTIPQISPDMQQQEPLDDSHGYLQQSD 95
             .|::.|..::.  ....||:: ..||          :..:|...|||.     .:.|.......
Mouse   125 ANIYTFPDFTKL--QVLDQPNI-DVPEEIVSDQSLDLTCYVPDNCPDMS-----PEIHWMYTDYL 181

  Fly    96 QQDLLNPNMLNCYQEPDVSTIQQQQLNLPGPLEQSDL--------------QRLLNPNMMYSEPD 146
            ...:..|:.:   :|.:.:.:.......|.|:....|              :||:..::.|:...
Mouse   182 PDPVFTPDQV---EEGNTAVLSSTLTFTPKPMHNGQLLGCRVNFPNTTYVYERLITLDIRYAPRT 243

  Fly   147 FSTSQQQQLLCNSAGYLQ-ESDHQGLLNPNMLNSFYEPDVSAM----------LQQPPPLYD--- 197
            ...:..|:::..|:..|. :.|.    ||..:.::|..|...|          |:...|..:   
Mouse   244 VWVNVSQEVMEGSSVVLHCDVDS----NPAPMITWYFGDKELMSETASNSSLSLENLTPEQEGVY 304

  Fly   198 ----SHGY----------LQQSDQQDLMNQNMMNSFQGANVSTTQQQQLLCNSHGHVQGNLSNI- 247
                .:||          :....::..:|:: :...:|::||      |.|.|.|:....|:.: 
Mouse   305 TCVGDNGYGNMNTSMYLAVNYPPREPWINES-LTVLEGSSVS------LQCTSKGNPMPTLTWLK 362

  Fly   248 -----------------------QSDQQY-----------LSNQNATDLFQ----EPNNSTMIDI 274
                                   |:|..|           .|:.|.|..|.    :.:..|::..
Mouse   363 DGELVGTITAEEGSVLELHEIMPQADGVYRCLAENEHGRASSSLNITVEFAPVLLDDSKCTIVRE 427

  Fly   275 GQQ---IEEGNNGYAHQPLIDPFELP------NHHQEQFPSVPISQNYPSYPVYQ---------H 321
            |.|   |..||    .:|.|: |.||      |:...:|.....|..|.|..|.:         :
Mouse   428 GVQCVCIASGN----PEPAIE-FYLPDLNVTINNSNNRFNYYTHSDGYTSTGVIKLQDKGERGNN 487

  Fly   322 GPVGSHF-----NMYGQQPPPLVLTNREEEHL 348
            |....|.     |:||.:...|.| .:|::::
Mouse   488 GDTAVHVHCSITNIYGSETIRLEL-QQEKKYM 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaKap4NP_648007.1 SRP1 45..432 CDD:227396 72/418 (17%)
armadillo repeat 98..134 CDD:293788 5/49 (10%)
armadillo repeat 140..176 CDD:293788 7/36 (19%)
armadillo repeat 192..217 CDD:293788 4/41 (10%)
armadillo repeat 224..260 CDD:293788 12/70 (17%)
armadillo repeat 266..300 CDD:293788 12/42 (29%)
armadillo repeat 308..342 CDD:293788 11/47 (23%)
armadillo repeat 350..383 CDD:293788
Kpna4NP_032493.1 SRP1 11..513 CDD:227396 82/480 (17%)
Nuclear localization signal. /evidence=ECO:0000250|UniProtKB:O00629 43..52
ARM 1, truncated 66..106 6/39 (15%)
armadillo repeat 73..98 CDD:293788 1/24 (4%)
ARM 2 107..149 6/44 (14%)
armadillo repeat 109..142 CDD:293788 2/34 (6%)
NLS binding site (major). /evidence=ECO:0000250|UniProtKB:O00629 137..229 14/100 (14%)
armadillo repeat 150..186 CDD:293788 5/40 (13%)
armadillo repeat 192..227 CDD:293788 4/34 (12%)
ARM 4 195..233 4/37 (11%)
ARM 5 234..278 8/47 (17%)
armadillo repeat 244..269 CDD:293788 5/28 (18%)
ARM 6 279..318 5/38 (13%)
armadillo repeat 279..311 CDD:293788 3/31 (10%)
NLS binding site (minor). /evidence=ECO:0000250|UniProtKB:O00629 306..394 14/94 (15%)
armadillo repeat 319..355 CDD:293788 8/42 (19%)
ARM 8 361..400 3/38 (8%)
armadillo repeat 361..395 CDD:293788 3/33 (9%)
ARM 9 401..443 11/45 (24%)
armadillo repeat 404..438 CDD:293788 8/33 (24%)
ARM 10, atypical 447..485 8/37 (22%)
Blue background indicates that the domain is not in the aligned region.

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