DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10479 and PVRAP

DIOPT Version :10

Sequence 1:NP_001261458.1 Gene:CG10479 / 38674 FlyBaseID:FBgn0035656 Length:379 Species:Drosophila melanogaster
Sequence 2:NP_729124.1 Gene:PVRAP / 38677 FlyBaseID:FBgn0052406 Length:474 Species:Drosophila melanogaster


Alignment Length:442 Identity:123/442 - (27%)
Similarity:187/442 - (42%) Gaps:89/442 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 NRFGATDGINKNTSKKDTQQKN-------KMLRNAIKCPGYSDIYGQYNKDSSFEKCDEWSNKLQ 65
            ||.|:|...:.::...|....|       .:.||..:.|..:   ...|.:|.|.:.|   |::.
  Fly    46 NRNGSTSSSSNSSPTADNSNSNSNSNSNANINRNLNQNPNSN---SNTNSNSYFNRFD---NRIA 104

  Fly    66 ------FPAAGEMDKQEPIQSRTHKVYDSMKSFLQRKLFAQPSHKEQILNEEPTSDYDEQDLLDS 124
                  ...||...:.....:| |....:..:.|:..| |..|.|..:......:....:..|..
  Fly   105 ANLAAVLTGAGARFRSSSCSNR-HPAGVANPAVLRSPL-ATISRKTSLATPPSPASLGRRRPLQL 167

  Fly   125 SYHADAEEEEEERDADCSCSSTGSSSTSSSS-------PTTPKRSPQKSLLSLNCWQSSQP-SSD 181
            ..||:....:.|:.|....|...:|.|..:|       |...||... .||..|  :.|:| ..|
  Fly   168 FTHANLNCNDNEKVAQTPSSDEDNSPTELNSCKRLADKPPLVKRLTM-GLLRQN--EESRPLVGD 229

  Fly   182 SNPEEE--------QDEEAEEDS--DAGISDCCQL------------LAENSPNTMSKR------ 218
            ..|...        .:....|||  |:...|.|:.            |.:|:...:.||      
  Fly   230 MTPLSAPLDIQPVYSNGYINEDSYIDSKFGDSCRQSLTAIPMLDNVNLNDNNEFNLKKRYLRETS 294

  Fly   219 -RRAAP-LFTRYISANQ---------------NSDDDEDEEPELLACPWYQPRITAKAALEHLQQ 266
             ..::| :|...:..||               |...|| |:.||....|||..|:...|:|.||.
  Fly   295 SANSSPKIFANRLRMNQGAVGQRCSSLANAFGNVGSDE-EDLELKDACWYQAGISRDIAVEVLQS 358

  Fly   267 ATPGSFLLRRST--PRHFELVLRLER--NNKVKTYPV-QSTRNQMYRLKGAKKQFTSLKALITHH 326
            .:||:||:|:|:  |..:.|.||:..  ..|:..|.: :|.|.  |::||.:|:|:|||||||||
  Fly   359 KSPGAFLVRKSSSKPGCYALTLRVPSPPGPKIANYIILRSPRG--YKIKGFRKEFSSLKALITHH 421

  Fly   327 SVMAEQLPLVLDMPRERHVVKPSSVRYADDFEPLESLQLLGILRSLQAKSIE 378
            |||.|.||:.|.|||..::  .||.|..|||:..:|||:|  |:.|:||::|
  Fly   422 SVMPELLPVPLAMPRPTNM--SSSRRNLDDFDTYDSLQML--LKYLRAKNME 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10479NP_001261458.1 SH2 249..326 CDD:198173 34/81 (42%)
PVRAPNP_729124.1 SH2 342..435 CDD:472789 43/94 (46%)

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