DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10479 and Sh2d5

DIOPT Version :10

Sequence 1:NP_001261458.1 Gene:CG10479 / 38674 FlyBaseID:FBgn0035656 Length:379 Species:Drosophila melanogaster
Sequence 2:NP_001418136.1 Gene:Sh2d5 / 366489 RGDID:1305952 Length:429 Species:Rattus norvegicus


Alignment Length:141 Identity:37/141 - (26%)
Similarity:54/141 - (38%) Gaps:16/141 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   240 DEEPELLACPWYQPRITAKAALEHLQQATPGSFLL--RRSTPRHFELVLRLERNNKVKTYPVQST 302
            :.|..|....|....::...||..|::...|:|||  ...|...:.|.:|.:..  |.::.|...
  Rat   292 ENEGSLTENIWAFAGLSRSCALALLRRDVHGAFLLWPEPGTSGQWSLSVRTQCG--VVSHQVFRN 354

  Fly   303 RNQMYRLKGAKKQFTSLKALITHHSVMAEQLPLVLDMPR-----ERHVVKPSSVRYADDFEPLE- 361
            ....|.|:....:|.||:||:..|:.|...|...|.|.|     |.....|.. |:.....||. 
  Rat   355 HLGRYCLEHLPAEFPSLEALVESHAGMERSLFCPLSMGRLNPTYEEQDSGPEG-RFPRTLRPLSH 418

  Fly   362 -----SLQLLG 367
                 .||.||
  Rat   419 AKSEAELQGLG 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10479NP_001261458.1 SH2 249..326 CDD:198173 20/78 (26%)
Sh2d5NP_001418136.1 PTB_tensin-related 23..150 CDD:269979
SH2 302..378 CDD:198173 20/77 (26%)
Blue background indicates that the domain is not in the aligned region.

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