DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10479 and shc-2

DIOPT Version :10

Sequence 1:NP_001261458.1 Gene:CG10479 / 38674 FlyBaseID:FBgn0035656 Length:379 Species:Drosophila melanogaster
Sequence 2:NP_494915.2 Gene:shc-2 / 173860 WormBaseID:WBGene00020867 Length:638 Species:Caenorhabditis elegans


Alignment Length:345 Identity:74/345 - (21%)
Similarity:129/345 - (37%) Gaps:76/345 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 SKKDTQQKNKMLRNAIKCPGYSDIYGQYNKDSSFEKCDEWSNKLQFPAAGEMDKQEPIQSRTHKV 85
            |.|:.::...:||||                          |:.|..|| :..|.....|..|..
 Worm   252 SLKEAEEIENVLRNA--------------------------NQSQVLAA-KQPKSAVSTSSMHPT 289

  Fly    86 YDSMKSFLQRKLFAQPSHKEQILNEEPTSDYDEQDLLDSSYHADAEEEEEERDADCSCSSTGSSS 150
              :..|.:..|..|......:.|.::.:...||          ..:.:.:.|......||.....
 Worm   290 --NTASTMTEKRSASTVFLNRFLGKKGSQTVDE----------SGQCKRKRRPVSAVFSSAIHRL 342

  Fly   151 TSSSSPTTPKR----SPQ----KSLLSLNCWQSSQPSSDSNPEEEQDEEAEEDSDAGISDCCQLL 207
            :||:|...|||    .||    :.||.|   |:....:.|:|..|:....:..:.:..:....:.
 Worm   343 SSSTSSVNPKRMSTIEPQAPTREQLLQL---QNQMRCAASSPVPEEPRPTDLCAASTTTSTSSVA 404

  Fly   208 AENSPNTMSKRRRAAPLFTRYISANQNS---DD---------DEDEEPELLACPWYQPRITAKAA 260
            :.:|.|..|.....:|:    ..|.|.:   |:         |:....:|..|.::..:.|..:.
 Worm   405 SSSSSNGSSSSTDTSPV----PPAPQTALVYDEKLGEWIYPIDQALMTQLDNCSYFVGQPTKDSM 465

  Fly   261 LEHLQQATPGSFLLRRSTPRHFELVLRL-----ERNNKVKTYPVQSTRN-QMYRLK--GAKKQFT 317
            :.:|.....|:|::|.|..:...|.|.:     ...:.:..|.:  .|| |.:|||  ..||.|.
 Worm   466 VYNLNTQPEGAFVIRYSESKSKCLALSMRVPCSHNPSGISHYLI--IRNEQGFRLKLSATKKPFP 528

  Fly   318 SLKALITHHSVMAEQLPLVL 337
            :|:.::|||||:...||..|
 Worm   529 TLQMMLTHHSVLESHLPCTL 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10479NP_001261458.1 SH2 249..326 CDD:198173 20/84 (24%)
shc-2NP_494915.2 PH-like 152..268 CDD:473070 6/41 (15%)
SH2 454..537 CDD:198173 20/84 (24%)

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