| Sequence 1: | NP_523943.1 | Gene: | Rcc1 / 38669 | FlyBaseID: | FBgn0002638 | Length: | 547 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_291050.1 | Gene: | Rcc1l / 94254 | MGIID: | 2137600 | Length: | 461 | Species: | Mus musculus |
| Alignment Length: | 450 | Identity: | 101/450 - (22%) |
|---|---|---|---|
| Similarity: | 162/450 - (36%) | Gaps: | 132/450 - (29%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 21 PKAKRARIAFHLELPKRRTVLGNVLVCGNG---------DVGQ---LGLGEDI---LERKRLSPV 70
Fly 71 AG---------IPDAVD---------ISAGGMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSES 117
Fly 118 KPDLI----DLPGKALCISAGDSHSACLLEDGRVFA--WGSFRDSHGNMGLTIDGNKRTPIDL-- 174
Fly 175 -MEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIIT 238
Fly 239 RAKPFEAIWATNYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKDIRHIAGGQH 303
Fly 304 HTVILTTDLKCSVVGRPEYGRLGLGD------VKDVVEKPTIVKKLTE-----KIVSVGCGEVCS 357
Fly 358 YAVTIDGKLYSWGSGVNNQLGVGDGDDELEPIVVVSKNTQGKHMLLASGGGQHAIFLVKA 417 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Rcc1 | NP_523943.1 | RCC1 | 42..89 | CDD:278826 | 17/79 (22%) |
| RCC1 | 92..141 | CDD:278826 | 14/52 (27%) | ||
| RCC1_2 | 131..158 | CDD:290274 | 8/28 (29%) | ||
| RCC1 | 144..193 | CDD:278826 | 13/53 (25%) | ||
| RCC1_2 | 182..209 | CDD:290274 | 8/26 (31%) | ||
| RCC1 | 363..414 | CDD:278826 | 14/50 (28%) | ||
| Rcc1l | NP_291050.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..35 | ||
| RCC1 1. /evidence=ECO:0000255 | 55..121 | 7/35 (20%) | |||
| RCC1 2. /evidence=ECO:0000255 | 125..188 | 15/62 (24%) | |||
| RCC1 | 127..186 | CDD:278826 | 12/58 (21%) | ||
| RCC1_2 | 173..202 | CDD:290274 | 10/28 (36%) | ||
| RCC1 3. /evidence=ECO:0000255 | 190..244 | 15/53 (28%) | |||
| RCC1 | 192..242 | CDD:278826 | 14/49 (29%) | ||
| RCC1_2 | 229..258 | CDD:290274 | 8/32 (25%) | ||
| RCC1 4. /evidence=ECO:0000255 | 245..297 | 14/55 (25%) | |||
| RCC1 | 245..295 | CDD:278826 | 13/53 (25%) | ||
| RCC1 5. /evidence=ECO:0000255 | 298..350 | 17/113 (15%) | |||
| RCC1 | 298..348 | CDD:278826 | 16/111 (14%) | ||
| RCC1 6. /evidence=ECO:0000255 | 352..408 | 14/60 (23%) | |||
| RCC1_2 | 393..422 | CDD:290274 | 8/28 (29%) | ||
| RCC1 7. /evidence=ECO:0000255 | 409..458 | 15/52 (29%) | |||
| RCC1 | 409..452 | CDD:278826 | 13/46 (28%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG5184 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.910 | |||||