Protein Alignment Rcc1 and AT1G65920

DIOPT Version :9

• Sequence 1: NP_523943.1
• Gene: Rcc1 / 38669
• FlyBaseID: FBgn0002638
• Length: 547
• Species: Drosophila melanogaster
• Sequence 2: NP_176767.1
• Gene: AT1G65920 / 842904
• AraportID: AT1G65920
• Length: 1006
• Species: Arabidopsis thaliana
• Alignment Length: 621
• Identity: 143/621 - (23%)
• Similarity: 233/621 - (37%)
• Gaps: 137/621 - (22%)

  Fly    37 RRTVLGNVLVCG------NGDVGQLGLGEDILERKRLSPVAGIPDAVDISAGGMHNLVLTKSGDI 95
            |..||.::::.|      :|...|    .|.|..|.|.. |.:.|...||.|..|..::|:.|::
plant   254 RSNVLKDIMIWGAITGLIDGSKNQ----NDALSPKLLES-ATMFDVQSISLGAKHAALVTRQGEV 313

  Fly    96 YSFGCNDEGALGRDTSEDGSESK--PDLIDLPGKALCISAGDSHSAC-LLEDGRVFAW---GSFR 154
            :.:|..:.|.||...:.|....|  ..|.|:..:::..|   .|..| :.|.|.::.|   |...
plant   314 FCWGNGNSGKLGLKVNIDIDHPKRVESLEDVAVRSVACS---DHQTCAVTESGELYLWGIDGGTI 375

  Fly   155 DSHGNMGLTIDGNKRTPIDLMEGTV-CCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSERSI 218
            :..|:..||     |...|::.|:: ..|:|.||.|..|:|::|::||.|....|.||..|..|:
plant   376 EQSGSQFLT-----RKISDVLGGSLTVLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLESV 435

  Fly   219 SGEGRRGKRDLLRPTQLIITRAKPFEA---IWATNYCTFMRESQTQVIWATGLNNFKQLAHETKG 280
            :   :..:.:.||..::|.....|:..   :...|...|........::..|..:..:|.|....
plant   436 T---KPKEVESLRRMKVISVSCGPWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSK 497

  Fly   281 KEFALTPIKTEL--KDIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKL 343
            ::...|.: |||  .|...::.|...||.|:.......:|...:|:||....|| .....::..|
plant   498 RKLVPTCV-TELIDHDFIKVSCGWTLTVALSISGTVYTMGSSIHGQLGCPRAKD-KSVNVVLGNL 560

  Fly   344 TEKIV-SVGCGEVCSYAVTIDGKLYSWGSGVNNQLGVGDGDDELEPIVV---------------- 391
            |.:.| .:..|......:|..|.:|:||.|:|.|||:||..|...|::|
plant   561 TRQFVKDIASGSHHVAVLTSFGNVYTWGKGMNGQLGLGDVRDRNSPVLVEPLGDRLVESIACGLN 625

  Fly   392 ----------VSKN--------------TQGKHMLLASGGGQHAIFLVKADKQDQKENVPVKVSG 432
                      :|.|              |:.||.....|     :....|....:..|..:..:.
plant   626 LTAAICLHKEISLNDQTACSSCKSAFGFTRRKHNCYNCG-----LLFCNACSSKKAVNASLAPNK 685

  Fly   433 SS-------------SISKKDKTPPQDNVDKEAENVDKQEQKENLPAKASTSSKKNKTPPQDNAD 484
            |.             ||::..:....||.....:.|.:: ..|:|..|.|.:..:|.  ||.|..
plant   686 SKLSRVCDSCFDHLWSITEFSRNVKMDNHTPRMQMVTRR-VSEDLTEKQSENEMQNL--PQANRS 747

  Fly   485 KEAE------------NVDKQEQKENLPAKAS---TSSKKIKTPPQDD--AAEEVE--------- 523
            .:.:            ..||.....:|....|   |||.||.|..:.:  ..||:|
plant   748 SDGQPRWGQVSGPSLFRFDKISTSSSLNLSVSARRTSSTKISTSSESNKILTEEIERLKAVIKNL 812

  Fly   524 -----------EESAQE--PTPKKAKKPAAKRGGKK 546
                       ||..||  .|.:.||:.|.|....|
plant   813 QRQCELGNEKMEECQQELDKTWEVAKEEAEKSKAAK 848

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rcc1	NP_523943.1	RCC1	42..89	CDD:278826	13/52 (25%)
		RCC1	92..141	CDD:278826	12/51 (24%)
		RCC1_2	131..158	CDD:290274	7/30 (23%)
		RCC1	144..193	CDD:278826	14/52 (27%)
		RCC1_2	182..209	CDD:290274	11/26 (42%)
		RCC1	363..414	CDD:278826	20/90 (22%)
AT1G65920	NP_176767.1	PH_PLC_plant-like	14..126	CDD:270171
		ATS1	<291..646	CDD:227511	89/367 (24%)
		FYVE	639..699	CDD:366594	8/64 (13%)
		Smc	<798..>864	CDD:224117	13/51 (25%)
		BRX_N	839..874	CDD:372684	3/10 (30%)
		BRX	948..1001	CDD:369842

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5184
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1062377at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.820