Protein Alignment Rcc1 and AT1G19880

DIOPT Version :9

• Sequence 1: NP_523943.1
• Gene: Rcc1 / 38669
• FlyBaseID: FBgn0002638
• Length: 547
• Species: Drosophila melanogaster
• Sequence 2: NP_173417.2
• Gene: AT1G19880 / 838576
• AraportID: AT1G19880
• Length: 538
• Species: Arabidopsis thaliana
• Alignment Length: 614
• Identity: 129/614 - (21%)
• Similarity: 219/614 - (35%)
• Gaps: 210/614 - (34%)

  Fly    42 GNVLVCGNGDVGQLGLGEDILERK-----RLSPVAGIP-DAVDISAGGMHNLVLTKSGDIYSFGC 100
            |.:|.||......:|..:..:|..     ||.|:.|:. ..|.......|.:.|...|..|::|.
plant    20 GELLFCGATAWDIIGKRKGAMEGNLVSPTRLRPLVGVNIRFVATGCASFHCVALDVEGRCYTWGR 84

  Fly   101 NDEGALG--------RDTSEDGSESKPDLIDLPGKALCISAGDSHSACLLEDGRV--FAWGSFRD 155
            |::|.||        |.|...|. ||..::    ||   :||.:|:..:.:||:.  |.|    :
plant    85 NEKGQLGHGDMIQRDRPTVVSGL-SKHKIV----KA---AAGRNHTVVVSDDGQSLGFGW----N 137

  Fly   156 SHGNMGLTIDGN-------KRTPIDLMEGTVCCSIASGADHLVIL--TTAGKVFTVGCAEQGQLG 211
            .:|.:||....|       :.||:..:......::|.|||..|.|  |....:.|.|..:.||||
plant   138 KYGQLGLGSAKNGFVSVEVESTPLPCVVSDEVTNVACGADFTVWLSSTEGASILTAGLPQYGQLG 202

  Fly   212 RLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFMRESQTQVIWATGLNNFKQLAH 276
            ..::...:                                   |::|..            :||:
plant   203 HGTDNEFN-----------------------------------MKDSSV------------RLAY 220

  Fly   277 ETKGKEFALTPIKTELKDIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGLGDVK--------DV 333
            |.:.:..|:..:..|  .|..:|.|.:|||.:..:......|...|||||..:.|        ||
plant   221 EAQPRPKAIASLAGE--TIVKVACGTNHTVAVDKNGYVYTWGFGGYGRLGHREQKDEWAPRRIDV 283

  Fly   334 VEKPTIVKKLTEKIVSVG-CGEVCSYAVTIDGKLYSWGSGVNNQLGVGDGDDELEPIVVVSKN-- 395
            .::..::.  ...|:|.| ....|:..   .|:||.||...||      |||.:.|..::..:
plant   284 FQRNNVLP--PNAILSAGSANSACTAG---GGQLYMWGKIKNN------GDDWMYPKPMMDLSGW 337

  Fly   396 -------------------------------------------------TQGKHMLLASGGGQHA 411
                                                             .:|.|::..:.|..|:
plant   338 NLRWMDSGSMHHFVGADSSCISWGHAQYGELGYGPNGQKSSAAPKKVDMLEGMHVMGVACGFCHS 402

  Fly   412 IFLVK----ADKQDQKENVPVKVSGSSSISK-KDKT--PPQDNVDKEAENVDKQEQKENLPAKAS 469
            :.:|.    ||:.:|.|....|.|...|:.: |::|  |.|..|.|...:      |:...:|||
plant   403 MVIVDRTDIADRLEQLEVYDGKGSLEESVEEVKEETLAPKQQAVTKRGAS------KKRKASKAS 461

  Fly   470 TSSKKNKTPPQDNADKEAENVDKQEQKENLPAKASTSSKKIKTPPQD-DAAEEVEEESAQEPTPK 533
            :.|:::.  .:||:|||                     |:::....| |.:|:.||.:.::.:.:
plant   462 SDSEQDS--DEDNSDKE---------------------KEVQGSDADSDYSEDGEEANGKKQSAR 503

  Fly   534 ----------------KAKKPAAKRGGKK 546
                            ..|.|..|.||::
plant   504 GRGRGRGARGRGGRTSNGKAPPVKTGGRR 532

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rcc1	NP_523943.1	RCC1	42..89	CDD:278826	12/52 (23%)
		RCC1	92..141	CDD:278826	17/56 (30%)
		RCC1_2	131..158	CDD:290274	7/28 (25%)
		RCC1	144..193	CDD:278826	15/57 (26%)
		RCC1_2	182..209	CDD:290274	9/28 (32%)
		RCC1	363..414	CDD:278826	15/101 (15%)
AT1G19880	NP_173417.2	ATS1	38..384	CDD:227511	85/417 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5184
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1062377at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.820