Protein Alignment Rcc1 and RUG2

DIOPT Version :9

• Sequence 1: NP_523943.1
• Gene: Rcc1 / 38669
• FlyBaseID: FBgn0002638
• Length: 547
• Species: Drosophila melanogaster
• Sequence 2: NP_199644.2
• Gene: RUG2 / 834886
• AraportID: AT5G48330
• Length: 455
• Species: Arabidopsis thaliana
• Alignment Length: 461
• Identity: 128/461 - (27%)
• Similarity: 190/461 - (41%)
• Gaps: 130/461 - (28%)

  Fly    36 KRRTVLGNVLVCGNGDVGQLGL--------GEDILERKRLSPVAGIP-DAVDISAGGMHNLVLTK 91
            :||||:.    .|:|::|.|||        |.|..|.   :.|:.:| |...||||..|:|.:|.
plant    42 ERRTVMS----FGDGNLGALGLSSSSIPGMGMDAYEP---TVVSNLPSDISSISAGHYHSLAVTS 99

  Fly    92 SGDIYSFGCNDEGALGR---DTSEDGSESKPDLIDLPG----KALCISAGDSHSACLLEDGRVFA 149
            ||:|:::|.||||.|||   |:|.| |.|:|..::  |    ......|....||.:.:||.::.
plant   100 SGEIWAWGRNDEGQLGRIVIDSSRD-SRSEPKRVE--GLENVNVQAAFASGVVSAAIGDDGSLWV 161

  Fly   150 WGSFRDSHGNMGLTIDGN----KRTP--IDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQG 208
            ||  |...|.:||   ||    .|.|  ::.:.......::.|..|.:.||..||||..|....|
plant   162 WG--RSKRGQLGL---GNGIIEARVPSRVENLAAEHVVKVSLGWGHALALTVDGKVFGWGYVADG 221

  Fly   209 QLGRLS---ERSI-------SGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFMRESQTQVI 263
            ::|.:.   |.|:       |.:|.....||    .|.....|..||:        .:|:...:.
plant   222 RVGNVGLPLEASLLDSITDGSMKGHHAAGDL----NLEAAEKKVVEAM--------SKENDMPIA 274

  Fly   264 WATGLNNFKQLAHETKGKEFALTPIKTELKDIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLG-- 326
            |.      ..|..||..::.|            .||.|..|::||..|......|...||:||
plant   275 WE------PCLVEETCNEKVA------------DIACGSDHSLILCHDGTLLSAGSNIYGQLGRS 321

  Fly   327 ---LGDVK--DVVEKPTIV----------------------------------KKLTEKI----- 347
               || :|  |:.|.|..:                                  :.|..::
plant   322 KQDLG-MKPVDITESPISIAAGLGHSLAICNRGERNILSWGWNRSRQLGRGKPENLPREVEGFDG 385

  Fly   348 ---VSVGCGEVCSYAVTIDGKLYSWGSGVNNQLGVGDGDDELEPIVVVSKNTQGKHMLLASGGGQ 409
               .||..|.|.|..||..|:.:.||.|.|.:||:|...||.||:::  ::.:| .:|.|..|..
plant   386 ESPASVSAGRVHSLCVTEKGEAWVWGCGKNGRLGLGSSSDEPEPMLL--EDVEG-CVLQAVAGFD 447

  Fly   410 HAIFLV 415
            |::.||
plant   448 HSLILV 453

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rcc1	NP_523943.1	RCC1	42..89	CDD:278826	18/55 (33%)
		RCC1	92..141	CDD:278826	21/55 (38%)
		RCC1_2	131..158	CDD:290274	8/26 (31%)
		RCC1	144..193	CDD:278826	14/54 (26%)
		RCC1_2	182..209	CDD:290274	9/26 (35%)
		RCC1	363..414	CDD:278826	17/50 (34%)
RUG2	NP_199644.2	ATS1	36..432	CDD:227511	121/435 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5184
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1062377at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.820