Protein Alignment Rcc1 and AT5G16040

DIOPT Version :9

• Sequence 1: NP_523943.1
• Gene: Rcc1 / 38669
• FlyBaseID: FBgn0002638
• Length: 547
• Species: Drosophila melanogaster
• Sequence 2: NP_197108.1
• Gene: AT5G16040 / 831461
• AraportID: AT5G16040
• Length: 396
• Species: Arabidopsis thaliana
• Alignment Length: 433
• Identity: 124/433 - (28%)
• Similarity: 194/433 - (44%)
• Gaps: 95/433 - (21%)

  Fly    43 NVLVCGNGDVGQLGLGEDILERKRLSPVAGIPDAVD------ISAGGMHNLVLTKSGDIYSFGCN 101
            :|:..|:|:.||||||.|  |.|.|   |.:.||::      :..|..::|.:...|.::::|.|
plant     6 SVIAWGSGEDGQLGLGTD--EEKEL---ASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWN 65

  Fly   102 DEGALGRDTSEDGSESKPDLIDLPGKALCISA--GDSHSACLLEDGRVFAWGSFRDSHGNMG--L 162
            ..|.||. ..|..:||.|.|:........:.|  |..|...:.:.||.:|||.  :.:|..|  .
plant    66 QRGTLGH-PPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGG--NEYGQCGEEP 127

  Fly   163 TIDGNKRTPI--DLMEGTVCC------SIASGADHLVILTTAGKVFTVGCA-EQGQLGRLSERSI 218
            :.|...| |:  |::....|.      .:|:|..|.|:||..|.|:|.|.. ..|.:.::|. .:
plant   128 SKDETGR-PVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWTWGQPWPPGDIKQISV-PV 190

  Fly   219 SGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFMRESQTQVIWATGLNNFKQL-AHETKGKE 282
            ..:|       |...:||...|  |..:       .::|..|  :||.|.|.:.|| ..:|:.:.
plant   191 RVQG-------LENVRLIAVGA--FHNL-------ALKEDGT--LWAWGNNEYGQLGTGDTQPRS 237

  Fly   283 FALTPIKTE-LKDIR--HIAGGQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEK--PTIVKK 342
            :   ||..: |.|:.  .||.|..|:..||.:.:....||.|:||||.|| .|...|  |..|..
plant   238 Y---PIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGD-NDKSSKMLPQKVNL 298

  Fly   343 LT-EKIVSVGCGEVCSYAVTIDGKLYSWGSGVNNQLGVG-------------------------D 381
            |. |.|:.|.||...|.|:|.||:::|:|.|.:.:||.|                         |
plant   299 LAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIHIPPPEGRFNHTD 363

  Fly   382 GDDELEPIVVVSKNTQGKHMLLASGGGQHAIFLVKADKQDQKE 424
            .:|:.:.|        .||:   :.||:|.:.:|:. |.||:|
plant   364 EEDDGKWI--------AKHV---ACGGRHTLAIVEW-KYDQEE 394

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rcc1	NP_523943.1	RCC1	42..89	CDD:278826	18/51 (35%)
		RCC1	92..141	CDD:278826	14/50 (28%)
		RCC1_2	131..158	CDD:290274	8/28 (29%)
		RCC1	144..193	CDD:278826	16/58 (28%)
		RCC1_2	182..209	CDD:290274	10/27 (37%)
		RCC1	363..414	CDD:278826	16/75 (21%)
AT5G16040	NP_197108.1	ATS1	6..339	CDD:227511	111/364 (30%)
		RCC1	320..385	CDD:395335	16/75 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5184
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	127	1.000	Inparanoid score	I1910
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1062377at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_100545
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X2826
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	6	5.770