Sequence 1: | NP_523943.1 | Gene: | Rcc1 / 38669 | FlyBaseID: | FBgn0002638 | Length: | 547 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_568268.3 | Gene: | AT5G12350 / 831110 | AraportID: | AT5G12350 | Length: | 1075 | Species: | Arabidopsis thaliana |
Alignment Length: | 636 | Identity: | 156/636 - (24%) |
---|---|---|---|
Similarity: | 233/636 - (36%) | Gaps: | 173/636 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 41 LGNVLVCGNG-DVGQLGLGE-----------DILERKRLSPVAGIPDAVDISAGGMHNLVLTKSG 93
Fly 94 DIYSFGCNDEGALGRDTSEDGSESKPDLIDLPGKAL------CISAGDSHSACLLEDGRVFAWGS 152
Fly 153 FRDSHGNMGLTIDGN-------KRTPIDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQL 210
Fly 211 GRLSERSI-------SGEGRRGKRDLLRPTQLIITRAKPFEAIWAT-------------NYCTFM 255
Fly 256 RESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELK-DIRHIAGGQHHTVILTTDLKCSVVGR 319
Fly 320 PEYGRLGL----GDVKDVVEKPTIVKKLTEKIV-SVGCGEVCSYAVTIDGKLYSWGSGVNNQLGV 379
Fly 380 GDGDDELEPIVVVS-KNTQ---------------------GKHMLLASGGGQHAIFLVK------ 416
Fly 417 ---------ADKQDQK------ENVPVKV----------------SGSSSISKKDK----TPPQD 446
Fly 447 NVDKEAENVDKQEQKENL---PAKASTSSKKNK---------TP-PQDNADKEAENVDKQEQKEN 498
Fly 499 LPAKASTSSKKI--KTPPQDDAAEEVEEESAQEPTPKKAKKPAAKRGGKKT 547 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rcc1 | NP_523943.1 | RCC1 | 42..89 | CDD:278826 | 17/58 (29%) |
RCC1 | 92..141 | CDD:278826 | 17/54 (31%) | ||
RCC1_2 | 131..158 | CDD:290274 | 6/26 (23%) | ||
RCC1 | 144..193 | CDD:278826 | 17/55 (31%) | ||
RCC1_2 | 182..209 | CDD:290274 | 11/26 (42%) | ||
RCC1 | 363..414 | CDD:278826 | 20/72 (28%) | ||
AT5G12350 | NP_568268.3 | PH_PLC_plant-like | 19..129 | CDD:270171 | |
RCC1_2 | 310..339 | CDD:290274 | 10/28 (36%) | ||
RCC1 | 327..375 | CDD:278826 | 17/53 (32%) | ||
RCC1 | 378..428 | CDD:278826 | 17/55 (31%) | ||
RCC1 | 432..480 | CDD:278826 | 14/61 (23%) | ||
RCC1 | 496..544 | CDD:278826 | 10/49 (20%) | ||
RCC1 | 547..596 | CDD:278826 | 14/53 (26%) | ||
RCC1 | 601..648 | CDD:278826 | 16/46 (35%) | ||
FYVE | 652..719 | CDD:279674 | 11/66 (17%) | ||
BRX_N | 911..946 | CDD:290432 | |||
BRX | 1006..1060 | CDD:285568 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5184 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.820 |