Protein Alignment Rcc1 and RUG1

DIOPT Version :9

• Sequence 1: NP_523943.1
• Gene: Rcc1 / 38669
• FlyBaseID: FBgn0002638
• Length: 547
• Species: Drosophila melanogaster
• Sequence 2: NP_680156.2
• Gene: RUG1 / 830771
• AraportID: AT5G08710
• Length: 434
• Species: Arabidopsis thaliana
• Alignment Length: 429
• Identity: 119/429 - (27%)
• Similarity: 176/429 - (41%)
• Gaps: 92/429 - (21%)

  Fly    41 LGNVLVC-----------------GNGDVGQLGLGEDILERKRLSPVAGIPDAVDISA---GGMH 85
            ||.:.||                 |:||.|:||||.  |:.:....|........|:|   ||.|
plant    31 LGPIGVCCSRWVSSESGKRFAAMWGSGDYGRLGLGN--LDSQWTPAVCSALSDHSITAVACGGAH 93

  Fly    86 NLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLIDLPGKALCISAGDSHSACLLEDGRVFAW 150
            .|.||::..:::.|.||.|.||....:..:....::..|....|.||||..|||.:..||.::.|
plant    94 TLFLTETRRVFATGLNDCGQLGVSDVKSHAMDPLEVSGLDKDILHISAGYYHSAAITVDGELYMW 158

  Fly   151 GSFRDSHGNMGLTIDGNKR-------TPIDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQG 208
            |  ::|.|.:||   |.|.       |.::.:.|....|:|.|::|.|.:|..|:|.:.|....|
plant   159 G--KNSSGQLGL---GKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTDGGEVLSWGGGGSG 218

  Fly   209 QLGRLSERSISGEGRRGKRDLLRPTQLIITR-AKPFEAIWATNY--------CT------FM-RE 257
            :||...:.|:.|        :||.......| .|..|.|..||.        ||      || .|
plant   219 RLGHGHQSSLFG--------ILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACTDENGSAFMFGE 275

  Fly   258 SQTQVIWATGLNNFKQLAHETKGKEFALTP-IKTELKDIRHIAGGQHHTVILTTDLKCSVVGRPE 321
            .....:...|:.|             |.|| |.:|:.....:|.|.:||.::|...:....|..|
plant   276 KSINKMGFGGVRN-------------ATTPSIISEVPYAEEVACGGYHTCVVTRGGELYTWGSNE 327

  Fly   322 YGRLGLGDVKDVVEKPTIVKK--LTEKIVSVGCGEVCSYAVTIDGKLYSWGSGVNN--------- 375
            .|.||. |...|...|..|:.  |...:..|.||...:.|:: |..:::||.|.::
plant   328 NGCLGT-DSTYVSHSPVRVEGPFLESTVSQVSCGWKHTAAIS-DNNVFTWGWGGSHGTFSVDGHS 390

  Fly   376 ---QLGVGDGDDELEPIVV-VSKNTQGKHMLLASGGGQH 410
               |||.|...|...|.:| :.||.:..|:   |.|..|
plant   391 SGGQLGHGSDVDYARPAMVDLGKNVRAVHI---SCGFNH 426

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rcc1	NP_523943.1	RCC1	42..89	CDD:278826	19/66 (29%)
		RCC1	92..141	CDD:278826	15/48 (31%)
		RCC1_2	131..158	CDD:290274	12/26 (46%)
		RCC1	144..193	CDD:278826	17/55 (31%)
		RCC1_2	182..209	CDD:290274	9/26 (35%)
		RCC1	363..414	CDD:278826	17/61 (28%)
RUG1	NP_680156.2	RCC1	54..97	CDD:395335	16/44 (36%)
		ATS1	93..432	CDD:227511	101/365 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5184
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	127	1.000	Inparanoid score	I1910
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1062377at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	3.870