Protein Alignment Rcc1 and AT3G26100

DIOPT Version :9

• Sequence 1: NP_523943.1
• Gene: Rcc1 / 38669
• FlyBaseID: FBgn0002638
• Length: 547
• Species: Drosophila melanogaster
• Sequence 2: NP_001326163.1
• Gene: AT3G26100 / 822208
• AraportID: AT3G26100
• Length: 532
• Species: Arabidopsis thaliana
• Alignment Length: 421
• Identity: 104/421 - (24%)
• Similarity: 171/421 - (40%)
• Gaps: 78/421 - (18%)

  Fly    58 GEDILERKRLSPVAGIPDAVDISAGGMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLI 122
            ||....|::...||| |.         |::.:|..|::|:||.|:.|.||...:||.:..:| :.
plant   137 GEACCRREKSQAVAG-PG---------HSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQP-VR 190

  Fly   123 DLPG-KALCISAGDSHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNK--RTP--IDLMEGTVCCS 182
            .|.| :.:..:||.:.:..:.:||:|:|.|  ::|.|.......|.|  .||  :..::......
plant   191 SLQGVRIIQAAAGAARTMLISDDGKVYACG--KESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQ 253

  Fly   183 IASGADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIW 247
            .|.|.....:|:..|||:|......|:||..:|.:     ....|.||.|.:.:     |...|
plant   254 AAIGNYFTAVLSREGKVYTFSWGNDGRLGHQTEAA-----DVEPRPLLGPLENV-----PVVQI- 307

  Fly   248 ATNYCTFMR---ESQTQVIWATGLNNFKQLAHETKGKE--------FALTPIKTELKDIRHIAGG 301
            |..||..:.   :.....:::.|.....:|.|.::..|        |.:..::.     |.:|.|
plant   308 AAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQP-----RVVAAG 367

  Fly   302 QHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTE-KIVSVGCGEVCSYAVTIDGK 365
            ..|..::..|.:....|...||.||.|: ::....|.:|:.|:. |.|.|..|:..::.|:.||.
plant   368 AWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVEGLSHVKAVHVATGDYTTFVVSDDGD 431

  Fly   366 LYSWGSGVNNQLGVGDGDDE--------LEPIVVVSKNTQGKHM--------------------- 401
            :||:|.|.:..||.....||        |.|.||.|.....:.|
plant   432 VYSFGCGESASLGHHPSFDEQGNRHANVLSPTVVTSLKQVNERMVQISLTNSIYWNAHTFALTES 496

  Fly   402 --LLASGGGQHAIFLVKADKQDQKENVPVKV 430
              |.|.|.|.......:..|..::..||.||
plant   497 GKLFAFGAGDQGQLGTELGKNQKERCVPEKV 527

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rcc1	NP_523943.1	RCC1	42..89	CDD:278826	8/30 (27%)
		RCC1	92..141	CDD:278826	15/49 (31%)
		RCC1_2	131..158	CDD:290274	8/26 (31%)
		RCC1	144..193	CDD:278826	13/52 (25%)
		RCC1_2	182..209	CDD:290274	7/26 (27%)
		RCC1	363..414	CDD:278826	20/81 (25%)
AT3G26100	NP_001326163.1	ATS1	154..527	CDD:227511	95/392 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5184
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1062377at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	4	3.780