Protein Alignment Rcc1 and AT3G02300

DIOPT Version :9

• Sequence 1: NP_523943.1
• Gene: Rcc1 / 38669
• FlyBaseID: FBgn0002638
• Length: 547
• Species: Drosophila melanogaster
• Sequence 2: NP_001327030.1
• Gene: AT3G02300 / 821167
• AraportID: AT3G02300
• Length: 482
• Species: Arabidopsis thaliana
• Alignment Length: 427
• Identity: 105/427 - (24%)
• Similarity: 153/427 - (35%)
• Gaps: 127/427 - (29%)

  Fly    50 GDVGQLGLGEDILERKRLSPVAGIPDAVDISAGGMHNLVLTKSGDIYSFGCNDEGALGRDTSED- 113
            |:..::.:||.|.|   ::|...||               |||. ||.:|.|..|..||:..|.
plant     7 GEFLKMDIGEIIGE---VAPSVSIP---------------TKSA-IYVWGYNQSGQTGRNEQEKL 52

  Fly   114 ---GSESKPDLIDLPGKA----LCISAGDSHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTP 171
               ..:..|:|...|..|    |.||.|..|:|.:..||.:||||:  :.:|.:|...:..::.|
plant    53 LRIPKQLPPELFGCPAGANSRWLDISCGREHTAAVASDGSLFAWGA--NEYGQLGDGTEVGRKHP 115

  Fly   172 IDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLI 236
                     ..:.......|...:.|...|...||.    |.::.::|
plant   116 ---------KKVKQLQSEFVKFVSCGAFCTAAIAEP----RENDGTLS----------------- 150

  Fly   237 ITRAKPFEAIWATNYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKDIRHIAGG 301
                                   |..:|..|.|....|.....|...|.|.       ||.::.|
plant   151 -----------------------TSRLWVWGQNQGSNLPRLFSGAFPATTA-------IRQVSCG 185

  Fly   302 QHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIV----KKLTE-----KIVSVGCGEVCS 357
            ..|.|.|:.:......|..|.|:||.|...:.::.|.::    |.|.|     ||:.:.|||..:
plant   186 TAHVVALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLSCGEYHT 250

  Fly   358 YAVTIDGKLYSWGSGVNNQLG---VGDGDDELEPIVVVSKN--------TQGKH--------MLL 403
            .|::..|::|:||.|...|||   :..||.||.|..||..:        ..|.|        .|.
plant   251 AALSDAGEVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVSMKEVACGGVHTCALSLEGALY 315

  Fly   404 ASGGGQHA----------IFLVKADKQDQKENVPVKV 430
            |.||||..          .|.|....:....||||.|
plant   316 AWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVLV 352

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rcc1	NP_523943.1	RCC1	42..89	CDD:278826	8/38 (21%)
		RCC1	92..141	CDD:278826	19/56 (34%)
		RCC1_2	131..158	CDD:290274	11/26 (42%)
		RCC1	144..193	CDD:278826	10/48 (21%)
		RCC1_2	182..209	CDD:290274	5/26 (19%)
		RCC1	363..414	CDD:278826	23/79 (29%)
AT3G02300	NP_001327030.1	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5184
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1062377at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.910