Protein Alignment Rcc1 and AT3G15430

DIOPT Version :9

• Sequence 1: NP_523943.1
• Gene: Rcc1 / 38669
• FlyBaseID: FBgn0002638
• Length: 547
• Species: Drosophila melanogaster
• Sequence 2: NP_001325716.1
• Gene: AT3G15430 / 820782
• AraportID: AT3G15430
• Length: 488
• Species: Arabidopsis thaliana
• Alignment Length: 361
• Identity: 90/361 - (24%)
• Similarity: 122/361 - (33%)
• Gaps: 132/361 - (36%)

  Fly    67 LSPVAGIPDAVDISAG------GMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSES------KP 119
            |..|....|.|:.|.|      |.::.:|..:..:||.|.:..|.|..     |||:      .|
plant    97 LQSVEQSSDMVETSQGKMQIATGKYHTLLINNSKVYSCGVSLSGVLAH-----GSETTQCVAFTP 156

  Fly   120 DLIDLPGKALCISAGDSHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIA 184
            .....|.:...:||..:|||.:|:.|:|...|. ..||                      ||
plant   157 IEFPFPAQVAQVSATQNHSAFVLQSGQVLTCGD-NSSH----------------------CC--- 195

  Fly   185 SGADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWAT 249
                                                    |..|..||    |.|.|..||:
plant   196 ----------------------------------------GHLDTSRP----IFRPKLVEAL--- 213

  Fly   250 NYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKDIRHIAGGQHHTVILTTDLKC 314
                                         ||     ||.|       .:|.|.|.||.|:.:...
plant   214 -----------------------------KG-----TPCK-------QVAAGLHFTVFLSREGHA 237

  Fly   315 SVVGRPEYGRLGLGDVKD-VVEKPTIVKKLTEKIVSVGCGEVCSYAVTIDGKLYSWGSGVNNQLG 378
            ...|...:|:||.||..| .|.|.....|....:|.:..|.....|||.||.:||:|||.|..||
plant   238 YTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLG 302

  Fly   379 VGDGDDELEPIVVVSKNTQGKHMLLASGGGQHAIFL 414
            .|:..|||:|.|:.:...:|.|:|..|.|.:||:.|
plant   303 HGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVAL 338

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rcc1	NP_523943.1	RCC1	42..89	CDD:278826	7/27 (26%)
		RCC1	92..141	CDD:278826	15/54 (28%)
		RCC1_2	131..158	CDD:290274	10/26 (38%)
		RCC1	144..193	CDD:278826	7/48 (15%)
		RCC1_2	182..209	CDD:290274	0/26 (0%)
		RCC1	363..414	CDD:278826	23/50 (46%)
AT3G15430	NP_001325716.1	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5184
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1062377at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.820