Sequence 1: | NP_523943.1 | Gene: | Rcc1 / 38669 | FlyBaseID: | FBgn0002638 | Length: | 547 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031752069.1 | Gene: | rpgr / 733454 | XenbaseID: | XB-GENE-982274 | Length: | 1225 | Species: | Xenopus tropicalis |
Alignment Length: | 599 | Identity: | 149/599 - (24%) |
---|---|---|---|
Similarity: | 221/599 - (36%) | Gaps: | 178/599 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MPRRKALTNNNNAGEAEQQPPK-----AKRARIAFHLELPKRRTVL----GNVLVCGNGDVGQLG 56
Fly 57 LGEDILERKRLSPVAGIPDAVDISAGGMHN-LVLTKSGDIYSFGCNDEGALG-RDTSEDGSESKP 119
Fly 120 DLIDLPGKALCISAGDSHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTPIDLMEGTVCCS-- 182
Fly 183 ----------IASGADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLII 237
Fly 238 TRAKPFEAIWATNYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKDIRHIAGGQ 302
Fly 303 HHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLT-EKIVSVGCGEVCSYAVTIDGKL 366
Fly 367 YSWGSGVNNQLGVGDGD--DELEPIV--------VVSKNTQGKHMLLASGGGQHAIFLVKADKQD 421
Fly 422 QKENVPVKVSGSSSISKKDKTP-PQDNVDKEAENVDKQEQKENL--------PAKASTSSKKNKT 477
Fly 478 PPQDNADKEAENVDKQEQKENLP--------AKASTSSKKIKT---PPQDDAAEEVEEESAQEPT 531
Fly 532 PKKAKKPAAKRGGK 545 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rcc1 | NP_523943.1 | RCC1 | 42..89 | CDD:278826 | 14/47 (30%) |
RCC1 | 92..141 | CDD:278826 | 18/49 (37%) | ||
RCC1_2 | 131..158 | CDD:290274 | 12/26 (46%) | ||
RCC1 | 144..193 | CDD:278826 | 15/60 (25%) | ||
RCC1_2 | 182..209 | CDD:290274 | 8/38 (21%) | ||
RCC1 | 363..414 | CDD:278826 | 16/60 (27%) | ||
rpgr | XP_031752069.1 | ATS1 | <42..334 | CDD:227511 | 101/372 (27%) |
RCC1 | 315..362 | CDD:395335 | 13/46 (28%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.010 |