Protein Alignment Rcc1 and sergef

DIOPT Version :9

• Sequence 1: NP_523943.1
• Gene: Rcc1 / 38669
• FlyBaseID: FBgn0002638
• Length: 547
• Species: Drosophila melanogaster
• Sequence 2: XP_021329502.1
• Gene: sergef / 565673
• ZFINID: ZDB-GENE-061220-11
• Length: 397
• Species: Danio rerio
• Alignment Length: 438
• Identity: 99/438 - (22%)
• Similarity: 154/438 - (35%)
• Gaps: 115/438 - (26%)

  Fly    14 GEAEQQPPKAKRARIAFHLELPKRRTVL------------GNVLVCGNGDVGQLGLGEDI-LERK 65
            |.||.|   |:..|:...|:..:.|.|.            |.:||||....|||||...: :...
Zfish    27 GNAEDQ---AEPRRVESGLQEEQIRAVTGGGGHSALISDSGELLVCGQNHKGQLGLCHTLEIMTF 88

  Fly    66 RLSPVAGIPDAVDISAGGMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLI-DLPGKAL 129
            :..|:.|......:|.|....::||..|.:.:.|.|..|.|| .::|....::|.|: .......
Zfish    89 QTCPLPGFGRVQQVSCGWDFTIILTGDGLVLACGSNAFGQLG-GSAEKTHSAEPLLLKSFHEPVT 152

  Fly   130 CISAGDSHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTPIDLMEGTVCC----------SIA 184
            .::||..|:......|.|:.||:...||....|   ..:..|..|.....|.          .:.
Zfish   153 SVAAGLRHALASTASGCVYQWGTGLSSHAKRML---NPQPVPSHLSSKEPCLVPGFAHVTTQKVI 214

  Fly   185 SGADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWAT 249
            :|:.|...||..|.||..|..:.|||       |||       .|..|..:.:.|:.
Zfish   215 AGSAHCACLTVNGDVFLWGSNKHGQL-------ISG-------SLFLPLPVALDRSM-------- 257

  Fly   250 NYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKD--IRHIAGGQHHTVILTTDL 312
                                                      |:|  :..:..|..|.|..|...
Zfish   258 ------------------------------------------LQDERVSDVHSGWTHLVAQTESG 280

  Fly   313 KCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTEKIVSV---------GCGEVCSYAVTIDGKLYS 368
            :....||..||:  ||.....:||.:..::|....|.|         .||...:.|| :.|:::|
Zfish   281 RVFTWGRSNYGQ--LGQTNHSMEKQSCDERLVRSPVEVKALFGATQISCGSEHNLAV-VGGRVFS 342

  Fly   369 WGSGVNNQLGVGDGDD--ELEPIVVVSKNTQGKHMLLASGGGQHAIFL 414
            ||...:...|.|...|  :.:||..::   ....:|:..|.| |::.|
Zfish   343 WGWNEHGMCGDGSLQDITQPQPIPALA---DAVALLIGCGAG-HSMAL 386

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rcc1	NP_523943.1	RCC1	42..89	CDD:278826	14/47 (30%)
		RCC1	92..141	CDD:278826	12/49 (24%)
		RCC1_2	131..158	CDD:290274	8/26 (31%)
		RCC1	144..193	CDD:278826	12/58 (21%)
		RCC1_2	182..209	CDD:290274	8/26 (31%)
		RCC1	363..414	CDD:278826	13/52 (25%)
sergef	XP_021329502.1	RCC1	13..387	CDD:332518	99/438 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170576198
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5184
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1062377at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.840