| Sequence 1: | NP_523943.1 | Gene: | Rcc1 / 38669 | FlyBaseID: | FBgn0002638 | Length: | 547 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_021332870.1 | Gene: | herc2 / 558479 | ZFINID: | ZDB-GENE-070718-6 | Length: | 4831 | Species: | Danio rerio |
| Alignment Length: | 572 | Identity: | 133/572 - (23%) |
|---|---|---|---|
| Similarity: | 210/572 - (36%) | Gaps: | 161/572 - (28%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 39 TVLGNVLVCGNGDVGQLGLG---EDILERKRLSPVAG-IPDAVDISAGGMHNLVLTKSGDIYSFG 99
Fly 100 CNDEGALGRDTSEDGSESKPDLID-LPGKAL-CISAGDSHSACLLEDGRVFAWGSFRDSHGNMGL 162
Fly 163 TIDGNKRTP-----IDLMEGTVCCSIASGA--DHLVILTTAGKVFTVGCAEQGQLGRLSERSISG 220
Fly 221 EGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFAL 285
Fly 286 TPIKTELKDIRHIAGGQHHTVILTTDLKCSVV---GRPEYGRLGLGDVKDV-VEKPTIVKKLT-E 345
Fly 346 KIVSVGCGEVCSYAVTIDGKLYSWGSGVNNQLGVGDGDDELEPIVVVSKNTQGKHMLLASGGGQH 410
Fly 411 AIFLVKADKQDQKENVPVKVS------GSSSISKKDKTPPQ---------DNVDKEAE------- 453
Fly 454 ----NVDKQEQKEN-----------------------LPAKASTSSKKNKTPPQD----NADKEA 487
Fly 488 ENVDKQEQKENLPAKASTSSKKIKTPPQDDAAEEVEEESAQEPTPKKAKKPA 539 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Rcc1 | NP_523943.1 | RCC1 | 42..89 | CDD:278826 | 15/50 (30%) |
| RCC1 | 92..141 | CDD:278826 | 19/50 (38%) | ||
| RCC1_2 | 131..158 | CDD:290274 | 9/26 (35%) | ||
| RCC1 | 144..193 | CDD:278826 | 10/55 (18%) | ||
| RCC1_2 | 182..209 | CDD:290274 | 8/28 (29%) | ||
| RCC1 | 363..414 | CDD:278826 | 11/50 (22%) | ||
| herc2 | XP_021332870.1 | RCC1 | <483..772 | CDD:332518 | |
| Cyt-b5 | 1204..1276 | CDD:306642 | |||
| MIB_HERC2 | 1862..1920 | CDD:310955 | |||
| UBA_HERC2 | 2453..2499 | CDD:270585 | |||
| Cul7 | 2548..2625 | CDD:314424 | |||
| ZZ_HERC2 | 2700..2744 | CDD:239084 | |||
| APC10-HERC2 | 2759..2902 | CDD:176485 | |||
| RCC1 | 2946..3316 | CDD:332518 | 102/390 (26%) | ||
| RCC1 | 4020..4325 | CDD:332518 | |||
| HECTc | 4418..4789 | CDD:238033 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG5184 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| ZFIN | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.910 | |||||