Sequence 1: | NP_523943.1 | Gene: | Rcc1 / 38669 | FlyBaseID: | FBgn0002638 | Length: | 547 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001004950.1 | Gene: | rcbtb2 / 448359 | XenbaseID: | XB-GENE-952598 | Length: | 526 | Species: | Xenopus tropicalis |
Alignment Length: | 348 | Identity: | 86/348 - (24%) |
---|---|---|---|
Similarity: | 132/348 - (37%) | Gaps: | 100/348 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 44 VLVCGNGDVGQLGLG--EDILERKRLSPVAGIPDAVDISAG-GMHNLVLTKSGDIYSFGCNDEGA 105
Fly 106 LGRDTSEDG---SESKPDLIDLPGKALCISAGDSHSACLLEDGRVFAWGSFRDSHGNMGLTIDGN 167
Fly 168 KRTP---IDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDL 229
Fly 230 LRPTQLIITRAKPFEAIWATNYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKD 294
Fly 295 IRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGLGD-------VKDVVEKPTIVKKLTEKIVSVGC 352
Fly 353 GEVC-----SYAVTIDGKLYSWG 370 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rcc1 | NP_523943.1 | RCC1 | 42..89 | CDD:278826 | 17/47 (36%) |
RCC1 | 92..141 | CDD:278826 | 14/51 (27%) | ||
RCC1_2 | 131..158 | CDD:290274 | 10/26 (38%) | ||
RCC1 | 144..193 | CDD:278826 | 13/51 (25%) | ||
RCC1_2 | 182..209 | CDD:290274 | 6/26 (23%) | ||
RCC1 | 363..414 | CDD:278826 | 4/8 (50%) | ||
rcbtb2 | NP_001004950.1 | ATS1 | <17..269 | CDD:227511 | 73/294 (25%) |
RCC1 | 250..298 | CDD:366085 | 13/58 (22%) | ||
BTB_POZ | 349..465 | CDD:365784 | |||
BACK_RCBTB2 | 462..526 | CDD:350604 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |