DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Rcc1 and CG6678

DIOPT Version :9

Sequence 1:	NP_523943.1	Gene:	Rcc1 / 38669	FlyBaseID:	FBgn0002638	Length:	547	Species:	Drosophila melanogaster
Sequence 2:	NP_650996.1	Gene:	CG6678 / 42581	FlyBaseID:	FBgn0038917	Length:	373	Species:	Drosophila melanogaster

Alignment Length:	180	Identity:	53/180 - (29%)
Similarity:	77/180 - (42%)	Gaps:	49/180 - (27%)

- Green bases have known domain annotations that are detailed below.

  Fly    42 GNVLVCGNGDVGQLGLGEDILER--KRLSPVAGIPDAVDISAGGMHNLVLTKSGDIYSFGCNDEG 104
            |:|...|||..|||||.|..:|.  :.|..:||| ....|:|||.|:..::..||:|::|.|..|
  Fly   193 GDVFTWGNGLRGQLGLAELRVEETPQLLEALAGI-KITQIAAGGWHSAAISAFGDLYTWGLNCSG 256

  Fly   105 ALGRDTSEDGSESK-------PDLIDLPGKALCISAGDSHSACLLEDGRVFAWGSFRDSHGNMGL 162
            .||....:.|...|       |.|.||| :..|..:|:|:..|  ...||||
  Fly   257 QLGLRVMKPGGVLKEPTVFPLPQLQDLP-ECACSQSGESNDDC--APLRVFA------------- 305

  Fly   163 TIDGNKRTPIDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGR 212
                                   |:.|.:::...|:::..|..:.|||||
  Fly   306 -----------------------GSRHTLLIRRCGRLWVSGWCKHGQLGR 332

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Rcc1	NP_523943.1	RCC1	42..89	CDD:278826	21/48 (44%)
		RCC1	92..141	CDD:278826	18/55 (33%)
		RCC1_2	131..158	CDD:290274	7/26 (27%)
		RCC1	144..193	CDD:278826	6/48 (13%)
		RCC1_2	182..209	CDD:290274	4/26 (15%)
		RCC1	363..414	CDD:278826
CG6678	NP_650996.1	ATS1	<78..371	CDD:227511	53/180 (29%)
		RCC1_2	176..205	CDD:290274	5/11 (45%)
		RCC1	192..241	CDD:278826	21/48 (44%)
		RCC1_2	228..257	CDD:290274	10/28 (36%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45442600
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5184
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1062377at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.840