Sequence 1: | NP_523943.1 | Gene: | Rcc1 / 38669 | FlyBaseID: | FBgn0002638 | Length: | 547 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038955861.1 | Gene: | Rpgr / 367733 | RGDID: | 1560136 | Length: | 1380 | Species: | Rattus norvegicus |
Alignment Length: | 625 | Identity: | 156/625 - (24%) |
---|---|---|---|
Similarity: | 240/625 - (38%) | Gaps: | 172/625 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 40 VLGN--VLVCGNGDVGQLGLGEDILERKRLSPVAGIPDAVDISA-GGMHNLVLTKSGDIYSFGCN 101
Fly 102 DEGALGRDTSED-------GSESKPDLIDLPGKALCISAGDSHSACLLEDGRVFAWGSFRDSHGN 159
Fly 160 MGLTIDGNKRTPIDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRR 224
Fly 225 GKRDLLRPTQLIITRAKP----------FEAIWATNYCTFMRESQTQVIWATGLNNFKQLAHETK 279
Fly 280 GKEFALTPIKTELKD--IRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEK--PTIV 340
Fly 341 K---KLTEKIVSVGCGEVCSYAV----TID--------------GKL----YSWGSGVNNQLG-- 378
Fly 379 ---------------VGDGDDELEPIVVVSKNTQGKHMLLASGGGQHAIFLVKADKQDQKENVPV 428
Fly 429 KVSGSS--SISKKDKTPPQD--------NVDKEAEN---VDKQEQKE-----NLPAKASTSSKK- 474
Fly 475 -------NKTPPQDNADK------EAENVDKQEQKENLPAKASTSSKK--------IKTP----- 513
Fly 514 -PQDDAAEEVEEESAQEPTPKKAKKPAAKR-----GGKKT 547 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rcc1 | NP_523943.1 | RCC1 | 42..89 | CDD:278826 | 17/49 (35%) |
RCC1 | 92..141 | CDD:278826 | 17/55 (31%) | ||
RCC1_2 | 131..158 | CDD:290274 | 13/26 (50%) | ||
RCC1 | 144..193 | CDD:278826 | 15/48 (31%) | ||
RCC1_2 | 182..209 | CDD:290274 | 9/26 (35%) | ||
RCC1 | 363..414 | CDD:278826 | 14/85 (16%) | ||
Rpgr | XP_038955861.1 | ATS1 | <78..368 | CDD:227511 | 92/309 (30%) |
RCC1 | 352..398 | CDD:395335 | 11/46 (24%) | ||
MDN1 | <625..904 | CDD:227596 | 8/33 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166337068 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5184 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.750 |