Sequence 1: | NP_523943.1 | Gene: | Rcc1 / 38669 | FlyBaseID: | FBgn0002638 | Length: | 547 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038956885.1 | Gene: | Sergef / 365243 | RGDID: | 1563497 | Length: | 481 | Species: | Rattus norvegicus |
Alignment Length: | 310 | Identity: | 81/310 - (26%) |
---|---|---|---|
Similarity: | 123/310 - (39%) | Gaps: | 77/310 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 42 GNVLVCGNGDVGQLGLG--EDILERKRLSPVAGIPDAVDISAGGMHNLVLTKSGDIYSFGCNDEG 104
Fly 105 ALGRDTSEDGSES--KPDLID-LPGKALCISAGDSHSACLLEDGRVFAWGSFRDSHG-------N 159
Fly 160 MGLTIDGNKRTPIDLME-GTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGR 223
Fly 224 RGKRDLLRPTQLIITRAKPFE-----AIWATNYCTFMRESQTQVIWATGLNNFKQ-------LAH 276
Fly 277 ETKGKEFALTPIKTELKDIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLG 326 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rcc1 | NP_523943.1 | RCC1 | 42..89 | CDD:278826 | 16/48 (33%) |
RCC1 | 92..141 | CDD:278826 | 16/51 (31%) | ||
RCC1_2 | 131..158 | CDD:290274 | 8/26 (31%) | ||
RCC1 | 144..193 | CDD:278826 | 16/56 (29%) | ||
RCC1_2 | 182..209 | CDD:290274 | 8/26 (31%) | ||
RCC1 | 363..414 | CDD:278826 | |||
Sergef | XP_038956885.1 | ATS1 | 17..>325 | CDD:227511 | 79/308 (26%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166337067 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5184 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.840 |