Protein Alignment Rcc1 and CG9135

DIOPT Version :9

• Sequence 1: NP_523943.1
• Gene: Rcc1 / 38669
• FlyBaseID: FBgn0002638
• Length: 547
• Species: Drosophila melanogaster
• Sequence 2: NP_001285655.1
• Gene: CG9135 / 33850
• FlyBaseID: FBgn0031769
• Length: 487
• Species: Drosophila melanogaster
• Alignment Length: 455
• Identity: 101/455 - (22%)
• Similarity: 153/455 - (33%)
• Gaps: 167/455 - (36%)

  Fly    39 TVLGNV----LVCGNGDVGQLGLGEDI--LERKRLSPVAGIPDAVDISAGGMHNLVLTKSGDIYS 97
            |:|.|:    |..|....|||||.:||  .|:..:.|.....:.|..:.|..|.|.||.:|.:|:
  Fly   128 TILINMDRKALGFGRNPSGQLGLSQDIKLAEKPTIIPALEQLNIVQAAVGRHHTLFLTDTGTVYA 192

  Fly    98 FGCNDEGALGRDTSEDGSESKPDLIDLPGKALCISAGDSHSACLLEDGRVFAWGSFRDSHGNMGL 162
            .|.|..|..|                         .|::|:       .:::
  Fly   193 CGENKSGQCG-------------------------VGNTHA-------NIYS------------- 212

  Fly   163 TIDGNKRTPIDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKR 227
                  .|||: ..|.....|..||:..|||...|.:.|.|..|.||||.
  Fly   213 ------PTPIN-YRGPPIIRIGCGAEFSVILDIKGSLHTFGLPEYGQLGH--------------- 255

  Fly   228 DLLRPTQLIITRAKPFEAIWATNYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIK-TE 291
                     .|.||.|.   ..|..:|..|:..:          |.:.:..|.||..:||:. .:
  Fly   256 ---------NTDAKYFV---NANKLSFHFETSPK----------KVVLYIEKSKEGHVTPVDGVQ 298

  Fly   292 LKDIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGLGDVKD------------------------ 332
            :.|   .|.|.:|||.:.:..:....|...:||||..:.||
  Fly   299 IVD---FACGNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQGRGGRSVFCGS 360

  Fly   333 ----VVEK-------------------PTIVKKLTE-KIVSVGCGEVCSYAVTIDGKLYSWG-SG 372
                :|.:                   |..|:.|:. .|..:||... |..::.|..|.:|| |.
  Fly   361 TFSLIVNELGLLFLFGQNKKTGEANMYPKPVQDLSGWNITDIGCANT-SIMISADDTLIAWGASP 424

  Fly   373 VNNQLGVGDGDDELEPIVVVSK------NTQGKHMLLASGGGQHAIFLV----KADKQDQKENVP 427
            ...:||:|    |.:....|.|      |.:...:.:   |..|.:.||    :|.|| :.|.:|
  Fly   425 TFGELGIG----EFQKSSTVPKEVPKLDNIKIPQVTM---GYSHTVLLVDTTHEATKQ-KYEKMP 481

  Fly   428  427
              Fly   482  481

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rcc1	NP_523943.1	RCC1	42..89	CDD:278826	16/52 (31%)
		RCC1	92..141	CDD:278826	8/48 (17%)
		RCC1_2	131..158	CDD:290274	2/26 (8%)
		RCC1	144..193	CDD:278826	8/48 (17%)
		RCC1_2	182..209	CDD:290274	10/26 (38%)
		RCC1	363..414	CDD:278826	14/57 (25%)
CG9135	NP_001285655.1	RCC1	139..184	CDD:278826	14/44 (32%)
		RCC1_2	171..200	CDD:290274	10/28 (36%)
		RCC1	188..236	CDD:278826	16/99 (16%)
		RCC1	239..312	CDD:278826	27/112 (24%)
		RCC1	317..366	CDD:278826	7/48 (15%)
		RCC1	414..465	CDD:278826	14/57 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45442606
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5184
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1062377at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.840