| Sequence 1: | NP_523943.1 | Gene: | Rcc1 / 38669 | FlyBaseID: | FBgn0002638 | Length: | 547 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_608388.2 | Gene: | HERC2 / 33035 | FlyBaseID: | FBgn0031107 | Length: | 4912 | Species: | Drosophila melanogaster |
| Alignment Length: | 413 | Identity: | 111/413 - (26%) |
|---|---|---|---|
| Similarity: | 173/413 - (41%) | Gaps: | 74/413 - (17%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 48 GNGDVGQLGLGEDILERKRL---SPVAGIP--DAVDISAGGMHNLVLTKSGDIYSFGCNDEGALG 107
Fly 108 RDTSEDGSESKPDLIDLPG-------KALCISAGDSHSACLLEDGRVFAWGSFRD---SHGNMGL 162
Fly 163 TIDGNKRTPIDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKR 227
Fly 228 DLLRPTQLIITRAKPFEAIW---ATNYCTFMRESQTQVI------WATGLNNFKQLAHETKGKEF 283
Fly 284 ALTPIKTELKDIRHIAG--------GQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIV 340
Fly 341 KKLT-EKIVSVGCGEVCSYAVTIDGKLYSWGSGVNNQLGVGDGDDELEPIVVVSKNTQGKHMLLA 404
Fly 405 SGGGQHAIFLVKADKQDQKENVP 427 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Rcc1 | NP_523943.1 | RCC1 | 42..89 | CDD:278826 | 12/45 (27%) |
| RCC1 | 92..141 | CDD:278826 | 13/55 (24%) | ||
| RCC1_2 | 131..158 | CDD:290274 | 9/29 (31%) | ||
| RCC1 | 144..193 | CDD:278826 | 16/51 (31%) | ||
| RCC1_2 | 182..209 | CDD:290274 | 9/26 (35%) | ||
| RCC1 | 363..414 | CDD:278826 | 16/50 (32%) | ||
| HERC2 | NP_608388.2 | RCC1 | 638..683 | CDD:278826 | |
| RCC1 | 687..737 | CDD:278826 | |||
| RCC1 | 740..787 | CDD:278826 | |||
| RCC1 | 790..841 | CDD:278826 | |||
| RCC1_2 | 828..857 | CDD:290274 | |||
| Cyt-b5 | 1290..1363 | CDD:278597 | |||
| MIB_HERC2 | 1928..1987 | CDD:284184 | |||
| UBA_HERC2 | 2515..2559 | CDD:270585 | |||
| Cul7 | 2624..2699 | CDD:288381 | |||
| APC10-HERC2 | 2762..2932 | CDD:176485 | |||
| RCC1 | 3037..3088 | CDD:278826 | |||
| RCC1 | 3091..3140 | CDD:278826 | |||
| RCC1 | 3144..3194 | CDD:278826 | |||
| RCC1 | 3197..3246 | CDD:278826 | |||
| RCC1 | 3250..3298 | CDD:278826 | |||
| RCC1 | 3302..3350 | CDD:278826 | |||
| RCC1_2 | 4136..4166 | CDD:290274 | 9/29 (31%) | ||
| RCC1 | 4154..4203 | CDD:278826 | 16/51 (31%) | ||
| RCC1 | 4206..4257 | CDD:278826 | 19/69 (28%) | ||
| RCC1 | 4260..4309 | CDD:278826 | 11/55 (20%) | ||
| RCC1 | 4312..4360 | CDD:278826 | 15/48 (31%) | ||
| RCC1 | 4364..4413 | CDD:278826 | 16/50 (32%) | ||
| HECTc | 4509..4880 | CDD:238033 | |||
| HECTc | 4553..4878 | CDD:214523 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG5184 | |
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| 3 | 2.820 | |||||