Protein Alignment Rcc1 and pim1

DIOPT Version :10

• Sequence 1: NP_523943.1
• Gene: Rcc1 / 38669
• FlyBaseID: FBgn0002638
• Length: 547
• Species: Drosophila melanogaster
• Sequence 2: NP_001342922.1
• Gene: pim1 / 2541059
• PomBaseID: SPBC557.03C
• Length: 539
• Species: Schizosaccharomyces pombe
• Alignment Length: 546
• Identity: 169/546 - (30%)
• Similarity: 264/546 - (48%)
• Gaps: 106/546 - (19%)

  Fly    20 PPKAKRARIAFHLELPKRRTVLGNVLVCGNGDVGQLGLGE---DILERKRLSPV-----AGIPDA 76
            |..|||..     ::|:..|...||.|.|:|.:.:||:||   |::.|.||:|:     .|:
pombe    54 PGSAKRIN-----KIPELPTERLNVYVFGSGSMNELGMGEEEMDVVYRPRLNPILSTDKVGV--- 110

  Fly    77 VDISAGGMHNLVLTKSGDIYSFGCNDEGALGRDT----SEDGSESKPDLID-LPGK---ALC--- 130
            ||::.||||:..|:..|.:|::|.||:.||||.|    .|:|.:...||:: .|.|   ||.
pombe   111 VDLAVGGMHSAALSHDGRVYTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLR 175

  Fly   131 ---ISAGDSHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRT--PIDLMEGTVCCSIASGADHL 190
               :...|:.:|.:.::|..|.||:||.|.|.:|.: |..|||  |..:....: |.:|:|.||:
pombe   176 VTKVICSDNLTAAITDNGCCFTWGTFRCSDGVLGYS-DSQKRTAEPTQMRLPEI-CQLATGTDHI 238

  Fly   191 VILTTAGKVFTVGCAEQGQLGR--LSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCT 253
            :.|||.|||:|.|..:|.||||  |..|.:.|         |.|..|.:   |...::.|.:|.:
pombe   239 IALTTTGKVYTWGNGQQFQLGRRMLERRRLQG---------LTPQPLAL---KNIISVGAGSYHS 291

  Fly   254 FMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKD------IRHIAGGQHHTVILTTDL 312
            |..:::.:| :|.|||..:|...|.:.:|......|..|.|      ::.|.||:|||:.|..|.
pombe   292 FAIDNKGRV-YAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSITGGEHHTLALLEDG 355

  Fly   313 KCSVVGRPEYGRLGLGD-------VKD------VVEKPTIVKKLTEKIVSVGCGEVCSYAVTIDG 364
            :....||.:..:||:.|       |||      .:..|||:..|| .::.|.||...:.|||.||
pombe   356 RVLAWGRDDRHQLGIPDNALPETVVKDEKGNNYYLSTPTIIPGLT-NVIQVVCGTHHNLAVTSDG 419

  Fly   365 KLYSWGSGVNNQLGVGDGDDELE-PIVVVSKNTQGKHMLLASGGGQHAIFLVKADKQDQKENVPV 428
            |:|||||..|.::|.||.|:::. |.:|.||..:...:.:|..|||.:|
pombe   420 KVYSWGSAENYEVGQGDNDEDVAVPTLVRSKAIKEVAIRVAGAGGQFSI---------------- 468

  Fly   429 KVSGSSSISKKDKTPPQDNVDKEAENVDKQEQKENLPAKASTSSKKNKTPPQDNADKEAENVDKQ 493
             ::|..:.|::   |..:.:..|.||..|.:.:|        :||.:.:|..|.......|.:
pombe   469 -IAGIPNASEE---PVANGIKSEPENEKKLKTEE--------TSKTDDSPVTDAKPDVTSNGE-- 519

  Fly   494 EQKENLPAKASTSSKKIKTPPQDDAA 519
                  |:.|::.||.....|....|
pombe   520 ------PSTATSESKDSVLEPSSTTA 539

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rcc1	NP_523943.1	ATS1	42..389	CDD:444065	135/392 (34%)
		Borrelia_P83	<419..>508	CDD:114011	15/88 (17%)
pim1	NP_001342922.1	ATS1	73..445	CDD:444065	134/390 (34%)