Protein Alignment Rcc1 and pim1

DIOPT Version :9

• Sequence 1: NP_523943.1
• Gene: Rcc1 / 38669
• FlyBaseID: FBgn0002638
• Length: 547
• Species: Drosophila melanogaster
• Sequence 2: NP_001342922.1
• Gene: pim1 / 2541059
• PomBaseID: SPBC557.03c
• Length: 539
• Species: Schizosaccharomyces pombe
• Alignment Length: 546
• Identity: 169/546 - (30%)
• Similarity: 264/546 - (48%)
• Gaps: 106/546 - (19%)

  Fly    20 PPKAKRARIAFHLELPKRRTVLGNVLVCGNGDVGQLGLGE---DILERKRLSPV-----AGIPDA 76
            |..|||..     ::|:..|...||.|.|:|.:.:||:||   |::.|.||:|:     .|:
pombe    54 PGSAKRIN-----KIPELPTERLNVYVFGSGSMNELGMGEEEMDVVYRPRLNPILSTDKVGV--- 110

  Fly    77 VDISAGGMHNLVLTKSGDIYSFGCNDEGALGRDT----SEDGSESKPDLID-LPGK---ALC--- 130
            ||::.||||:..|:..|.:|::|.||:.||||.|    .|:|.:...||:: .|.|   ||.
pombe   111 VDLAVGGMHSAALSHDGRVYTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLR 175

  Fly   131 ---ISAGDSHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRT--PIDLMEGTVCCSIASGADHL 190
               :...|:.:|.:.::|..|.||:||.|.|.:|.: |..|||  |..:....: |.:|:|.||:
pombe   176 VTKVICSDNLTAAITDNGCCFTWGTFRCSDGVLGYS-DSQKRTAEPTQMRLPEI-CQLATGTDHI 238

  Fly   191 VILTTAGKVFTVGCAEQGQLGR--LSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCT 253
            :.|||.|||:|.|..:|.||||  |..|.:.|         |.|..|.:   |...::.|.:|.:
pombe   239 IALTTTGKVYTWGNGQQFQLGRRMLERRRLQG---------LTPQPLAL---KNIISVGAGSYHS 291

  Fly   254 FMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKD------IRHIAGGQHHTVILTTDL 312
            |..:::.:| :|.|||..:|...|.:.:|......|..|.|      ::.|.||:|||:.|..|.
pombe   292 FAIDNKGRV-YAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSITGGEHHTLALLEDG 355

  Fly   313 KCSVVGRPEYGRLGLGD-------VKD------VVEKPTIVKKLTEKIVSVGCGEVCSYAVTIDG 364
            :....||.:..:||:.|       |||      .:..|||:..|| .::.|.||...:.|||.||
pombe   356 RVLAWGRDDRHQLGIPDNALPETVVKDEKGNNYYLSTPTIIPGLT-NVIQVVCGTHHNLAVTSDG 419

  Fly   365 KLYSWGSGVNNQLGVGDGDDELE-PIVVVSKNTQGKHMLLASGGGQHAIFLVKADKQDQKENVPV 428
            |:|||||..|.::|.||.|:::. |.:|.||..:...:.:|..|||.:|
pombe   420 KVYSWGSAENYEVGQGDNDEDVAVPTLVRSKAIKEVAIRVAGAGGQFSI---------------- 468

  Fly   429 KVSGSSSISKKDKTPPQDNVDKEAENVDKQEQKENLPAKASTSSKKNKTPPQDNADKEAENVDKQ 493
             ::|..:.|::   |..:.:..|.||..|.:.:|        :||.:.:|..|.......|.:
pombe   469 -IAGIPNASEE---PVANGIKSEPENEKKLKTEE--------TSKTDDSPVTDAKPDVTSNGE-- 519

  Fly   494 EQKENLPAKASTSSKKIKTPPQDDAA 519
                  |:.|::.||.....|....|
pombe   520 ------PSTATSESKDSVLEPSSTTA 539

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rcc1	NP_523943.1	RCC1	42..89	CDD:278826	21/54 (39%)
		RCC1	92..141	CDD:278826	20/62 (32%)
		RCC1_2	131..158	CDD:290274	9/26 (35%)
		RCC1	144..193	CDD:278826	19/50 (38%)
		RCC1_2	182..209	CDD:290274	13/26 (50%)
		RCC1	363..414	CDD:278826	22/51 (43%)
pim1	NP_001342922.1	ATS1	1..478	CDD:227511	152/464 (33%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5184
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H55567
Inparanoid	1	1.050	193	1.000	Inparanoid score	I1038
OMA	1	1.010	-	-		QHG58672
OrthoFinder	1	1.000	-	-		FOG0004765
OrthoInspector	1	1.000	-	-		oto101504
orthoMCL	1	0.900	-	-		OOG6_100545
Panther	1	1.100	-	-	LDO	PTHR45982
Phylome	0	0.000	Not matched by this tool.
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1072
SonicParanoid	1	1.000	-	-		X2826
TreeFam	1	0.960	-	-
	12	11.950